RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 IGHV4-61A0A0C4DH41 118 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 TEX13CA0A0J9YWL9 993 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 OR6C68A6NDL8 312 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 GABRPO00591 440 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 RNF13O43567 381 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 PLPP2O43688 288 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 TFP02787 698 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 GYPBP06028 91 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 MRPL3P09001 348 aaKnown RBP10.83□□□□□ -0.68
SHMT2-230ENST00000557427 KRR1Q13601 381 aaKnown RBP10.83□□□□□ -0.68
SHMT2-230ENST00000557427 RAB35Q15286 201 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 FAM69AQ5T7M9 428 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 LEG1Q6P5S2 330 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 VASH1Q7L8A9 365 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-230ENST00000557427 CCDC190Q86UF4 302 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 SLC35F2Q8IXU6 374 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 MINDY2Q8NBR6 621 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 OR52N5Q8NH56 324 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 MFSD8Q8NHS3 518 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 WDFY2Q96P53 400 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 TBX5Q99593 518 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 USB1Q9BQ65 265 aaKnown RBP10.83□□□□□ -0.68
SHMT2-230ENST00000557427 SF3B5Q9BWJ5 86 aaKnown RBP10.83□□□□□ -0.68
SHMT2-230ENST00000557427 SLC7A10Q9NS82 523 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 SNTG1Q9NSN8 517 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 CBLN4Q9NTU7 201 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 FAIMQ9NVQ4 179 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 GRHPRQ9UBQ7 328 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 PLCE1Q9P212 2302 aa10.83□□□□□ -0.68
SHMT2-230ENST00000557427 VWFP04275 2813 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 A0A1W2PQL4 384 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-230ENST00000557427 ISPDA4D126 451 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 OR5H1A6NKK0 313 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 E7EQL1 145 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 LOC110117498-PIK3R3F6TDL0 507 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 TMPRSS2O15393 492 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 OR2T1O43869 369 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 RGS9O75916 674 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-230ENST00000557427 KRT33AO76009 404 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 VAMP5O95183 116 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 IGHMP01871 453 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 CD1AP06126 327 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 COX5AP20674 150 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 GTF2E2P29084 291 aaKnown RBP10.82□□□□□ -0.68
SHMT2-230ENST00000557427 CDKN2AP42771 156 aaKnown RBP10.82□□□□□ -0.68
SHMT2-230ENST00000557427 ZNF83P51522 516 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 P2RY4P51582 365 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 ACTG1P63261 375 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 GABRA6Q16445 453 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 ZNF181Q2M3W8 571 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 CDONQ4KMG0 1287 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 TIMM23BQ5SRD1 257 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 LINC01590Q5TEZ4 76 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 DCDC5Q6ZRR9 648 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 CREB3L2Q70SY1 520 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 OR5J2Q8NH18 312 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 AP3S1Q92572 193 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 C4orf36Q96KX1 117 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 TSPAN32Q96QS1 320 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 TMED9Q9BVK6 235 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 MROQ9BYG7 248 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 KCNN2Q9H2S1 579 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 TBCCD1Q9NVR7 557 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 RASD1Q9Y272 281 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 UGT2A1Q9Y4X1 527 aa10.82□□□□□ -0.68
SHMT2-230ENST00000557427 FTCDNL1E5RQL4 147 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 H7C417 338 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 OGG1O15527 345 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 UPK1BO75841 260 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 RENP00797 406 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 F13BP05160 661 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 ITGA5P08648 1049 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 CFL1P23528 166 aaKnown RBP10.81□□□□□ -0.68
SHMT2-230ENST00000557427 GRPRP30550 384 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 SDC2P34741 201 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 NR4A2P43354 598 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 SELENOPP49908 381 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 IFITM3Q01628 133 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 HNRNPA0Q13151 305 aaKnown RBP10.81□□□□□ -0.68
SHMT2-230ENST00000557427 MFSD13AQ14CX5 517 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 C11orf91Q3C1V1 193 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 MIDNQ504T8 468 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 MESTQ5EB52 335 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 SPANXN2Q5MJ10 180 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 DMKNQ6E0U4 476 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-230ENST00000557427 TMEM91Q6ZNR0 172 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 CENPSQ8N2Z9 138 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 PARP16Q8N5Y8 322 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 OR2T4Q8NH00 348 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 GCDHQ92947 438 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-230ENST00000557427 TMEM45BQ96B21 275 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 CEP19Q96LK0 163 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 MNTQ99583 582 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 KCNS3Q9BQ31 491 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 ALG12Q9BV10 488 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 INIPQ9NRY2 104 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 MRPL39Q9NYK5 338 aaKnown RBP10.81□□□□□ -0.68
SHMT2-230ENST00000557427 TAS2R5Q9NYW4 299 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 NPAP1Q9NZP6 1156 aa10.81□□□□□ -0.68
SHMT2-230ENST00000557427 SIRT4Q9Y6E7 314 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms