RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 H3F3CQ6NXT2 135 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 UQCC3Q6UW78 93 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 ZDHHC22Q8N966 263 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 ZSCAN4Q8NAM6 433 aaPredicted RBP10.16□□□□□ -0.78
SRP54-213ENST00000556994 SLC26A10Q8NG04 563 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 OR4A4PQ8NGN8 299 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 OR13C9Q8NGT0 318 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 ADAMTS18Q8TE60 1221 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 NDRG3Q9UGV2 375 aa10.16□□□□□ -0.78
SRP54-213ENST00000556994 MSGN1A6NI15 193 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 A8MVM7 634 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 TMEM150CB9EJG8 249 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 PRAMEF26H0Y7S4 382 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 NUDT21O43809 227 aaKnown RBP10.15□□□□□ -0.78
SRP54-213ENST00000556994 NPIPB7O75200 414 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 ZNF217O75362 1048 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 DUS4LO95620 317 aaKnown RBP10.15□□□□□ -0.78
SRP54-213ENST00000556994 H2BFMP0C1H6 154 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 CRABP1P29762 137 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 NPBWR1P48145 328 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 GABRA4P48169 554 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 NPY4RP50391 375 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 POLR2HP52434 150 aaKnown RBP10.15□□□□□ -0.78
SRP54-213ENST00000556994 PNLIPRP2P54317 469 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 SLC26A5P58743 744 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 EBPQ15125 230 aaKnown RBP10.15□□□□□ -0.78
SRP54-213ENST00000556994 SLC9A3R2Q15599 337 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 PHF19Q5T6S3 580 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 HLA-DQA1Q5Y7H0 255 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 ZNF704Q6ZNC4 412 aaPredicted RBP10.15□□□□□ -0.78
SRP54-213ENST00000556994 C16orf47Q6ZP98 133 aaPredicted RBP10.15□□□□□ -0.78
SRP54-213ENST00000556994 BAP18Q8IXM2 172 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 OR10R2Q8NGX6 335 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 C2CD4CQ8TF44 421 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 ARL5BQ96KC2 179 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 EMC6Q9BV81 110 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 LRRC61Q9BV99 259 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 ESRP2Q9H6T0 727 aaKnown RBP10.15□□□□□ -0.78
SRP54-213ENST00000556994 OR2S2Q9NQN1 319 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 CYB5R1Q9UHQ9 305 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 ZNF107Q9UII5 783 aaPredicted RBP10.15□□□□□ -0.78
SRP54-213ENST00000556994 CYP8B1Q9UNU6 501 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 FAM96BQ9Y3D0 163 aa10.15□□□□□ -0.78
SRP54-213ENST00000556994 CPAMD8Q8IZJ3 1885 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 ALG1L2C9J202 215 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 MS4A18H0YCH9 400 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 OR2T1O43869 369 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 AHSA1O95433 338 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 ISG15P05161 165 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 H2AFB1P0C5Y9 115 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 TPT1P13693 172 aaKnown RBP10.15□□□□□ -0.79
SRP54-213ENST00000556994 RAB6AP20340 208 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 NFYBP25208 207 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 ABCD3P28288 659 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 MS4A18Q3C1V0 323 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 TMEM244Q5VVB8 128 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 AWAT2Q6E213 333 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 ANGPTL5Q86XS5 388 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 ZNF101Q8IZC7 436 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 ZFP82Q8N141 532 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 OR4K15Q8NH41 348 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 HRH4Q9H3N8 390 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 CYTL1Q9NRR1 136 aa10.15□□□□□ -0.79
SRP54-213ENST00000556994 KLF2Q9Y5W3 355 aaPredicted RBP10.15□□□□□ -0.79
SRP54-213ENST00000556994 PHF3Q92576 2039 aaKnown RBP10.14□□□□□ -0.79
SRP54-213ENST00000556994 TEX13DA0A0J9YY54 714 aaPredicted RBP10.14□□□□□ -0.79
SRP54-213ENST00000556994 EPOPA6NHQ4 379 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 ZNF705EA8MWA4 302 aaPredicted RBP10.14□□□□□ -0.79
SRP54-213ENST00000556994 SYT7O43581 403 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 TSPAN2O60636 221 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 TTRP02766 147 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 CD79AP11912 226 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 CAPZBP47756 277 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 QRFPP83859 136 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 SGCAQ16586 387 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 MICBQ29980 383 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 NKAIN3Q8N8D7 197 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 ZNF248Q8NDW4 579 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 OR1M1Q8NGA1 313 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 ARL11Q969Q4 196 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 PTX4Q96A99 478 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 CNTNAP3BQ96NU0 1288 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 C12orf57Q99622 126 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 CMSS1Q9BQ75 279 aaKnown RBP10.14□□□□□ -0.79
SRP54-213ENST00000556994 SOX7Q9BT81 388 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 OR5AC2Q9NZP5 309 aa10.14□□□□□ -0.79
SRP54-213ENST00000556994 A0A0A6YYD4 124 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 A0A1W2PP11 408 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 DBX1A6NMT0 343 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 F8VVB4 439 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 F8VWA3 439 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 FARS2O95363 451 aaKnown RBP10.13□□□□□ -0.79
SRP54-213ENST00000556994 GALNSP34059 522 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 RAB13P51153 203 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 POU3F1Q03052 451 aaPredicted RBP10.13□□□□□ -0.79
SRP54-213ENST00000556994 NSDHLQ15738 373 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 C9orf50Q5SZB4 431 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 SHISA6Q6ZSJ9 500 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 DEFB119Q8N690 84 aa10.13□□□□□ -0.79
SRP54-213ENST00000556994 TMEM104Q8NE00 496 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms