RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 UBE2UQ5VVX9 321 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 ULK3Q6PHR2 472 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 NPSR1Q6W5P4 371 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 C12orf54Q6X4T0 127 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 TEX43Q6ZNM6 134 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 TMEM179Q6ZVK1 233 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 STRADAQ7RTN6 431 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 MYOCDQ8IZQ8 938 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 MREGQ8N565 214 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 TRAM1L1Q8N609 369 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 ASCC1Q8N9N2 400 aaKnown RBP2.44□□□□□ -2.02
SCFD1-221ENST00000556534 OR5AR1Q8NGP9 310 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 OR5W2Q8NH69 310 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 LKAAEAR1Q8TD35 194 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 TCP10LQ8TDR4 215 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 ISOC2Q96AB3 205 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 FAM3DQ96BQ1 224 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 LRRC39Q96DD0 335 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 C19orf60Q96EN9 201 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 HAUS4Q9H6D7 363 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 DDX19BQ9UMR2 479 aa2.44□□□□□ -2.02
SCFD1-221ENST00000556534 CIB4A0PJX0 185 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 SLC22A20A6NK97 555 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 M0QX08 132 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 PLPP1O14494 284 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 KMOO15229 486 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 GMDSO60547 372 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 TDP2O95551 362 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 CCDC172P0C7W6 258 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 CALM1P0DP23 149 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 CALM2P0DP24 149 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 CALM3P0DP25 149 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 PSMC3P17980 439 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 ATF6P18850 670 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 PMCHP20382 165 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 GABRR2P28476 465 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 ZNF138P52744 262 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 ATP5J2P56134 94 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 PTPN20Q4JDL3 420 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 ADNP2Q6IQ32 1131 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 C16orf87Q6PH81 154 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 ZNF493Q6ZR52 646 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 NCCRP1Q6ZVX7 275 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-221ENST00000556534 KIF2BQ8N4N8 673 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 OTUD6BQ8N6M0 293 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 NPWQ8N729 165 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 TMEM104Q8NE00 496 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 RPEQ96AT9 228 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 DYNLL2Q96FJ2 89 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 ZNF317Q96PQ6 595 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-221ENST00000556534 TMEM175Q9BSA9 504 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 ING2Q9H160 280 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 GAL3ST2Q9H3Q3 398 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 MRM3Q9HC36 420 aaKnown RBP2.43□□□□□ -2.02
SCFD1-221ENST00000556534 LZTFL1Q9NQ48 299 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 ZC4H2Q9NQZ6 224 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 AGPAT3Q9NRZ7 376 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 PSG8Q9UQ74 426 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 STK38LQ9Y2H1 464 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 WIF1Q9Y5W5 379 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 BZW2Q9Y6E2 419 aaKnown RBP2.43□□□□□ -2.02
SCFD1-221ENST00000556534 KCNE3Q9Y6H6 103 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 TMEM94Q12767 1356 aa2.43□□□□□ -2.02
SCFD1-221ENST00000556534 MROH7Q68CQ1 1323 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 TRAV6A0A075B6T7 132 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 LINC00854A0A1B0GVQ3 168 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 H7C0C1 242 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 H7C1H1 209 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 NME4O00746 187 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 NVLO15381 856 aaKnown RBP2.42□□□□□ -2.02
SCFD1-221ENST00000556534 RNF113AO15541 343 aaKnown RBP2.42□□□□□ -2.02
SCFD1-221ENST00000556534 XRCC2O43543 280 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 CHMP2AO43633 222 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 NEMFO60524 1076 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 KLK1P06870 262 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 PRPS2P11908 318 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 GABRG2P18507 467 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 GGT1P19440 569 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 RAB4AP20338 218 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 USF1P22415 310 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-221ENST00000556534 CYB561P49447 251 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 SYCNQ0VAF6 134 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 HES5Q5TA89 166 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 LIN9Q5TKA1 542 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 DNAJC24Q6P3W2 148 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 MBOAT2Q6ZWT7 520 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 ZNF547Q8IVP9 402 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 FAM58AQ8N1B3 248 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 OR10AD1Q8NGE0 317 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 OR52E2Q8NGJ4 325 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 OR13C9Q8NGT0 318 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 OR8K3Q8NH51 312 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 ITFG1Q8TB96 612 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 BAALCQ8WXS3 180 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 CACNG8Q8WXS5 425 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 PDXPQ96GD0 296 aa2.42□□□□□ -2.02
SCFD1-221ENST00000556534 STMN4Q9H169 189 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-221ENST00000556534 UBE2ZQ9H832 354 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-221ENST00000556534 IGHV3-74A0A0B4J1X5 117 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 LOC100506127A0A0U1RQW1 187 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms