RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 NPRL2Q8WTW4 380 aa11.45□□□□□ -0.58
ACTN1-219ENST00000556432 SPRYD4Q8WW59 207 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-219ENST00000556432 RASSF5Q8WWW0 418 aa11.45□□□□□ -0.58
ACTN1-219ENST00000556432 GRHPRQ9UBQ7 328 aa11.45□□□□□ -0.58
ACTN1-219ENST00000556432 KPTNQ9Y664 436 aa11.45□□□□□ -0.58
ACTN1-219ENST00000556432 hCG_1807616A0A1W2PRN6 198 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 MEIOCA2RUB1 952 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 OOEPA6NGQ2 149 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 NPFFO15130 113 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 NDUFA2O43678 99 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 EFNB2P52799 333 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 WDR4P57081 412 aaKnown RBP11.44□□□□□ -0.58
ACTN1-219ENST00000556432 POU4F2Q12837 409 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 SELPLGQ14242 412 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 CCDC92Q53HC0 331 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-219ENST00000556432 ZBTB37Q5TC79 503 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 DLEU7Q6UYE1 221 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 CFHR4Q92496 578 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 R3HDM4Q96D70 268 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 CLPTM1LQ96KA5 538 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 PARD6BQ9BYG5 372 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 POLR2J2Q9GZM3 115 aaKnown RBP11.44□□□□□ -0.58
ACTN1-219ENST00000556432 POLR2J3Q9H1A7 115 aaKnown RBP11.44□□□□□ -0.58
ACTN1-219ENST00000556432 ATPIF1Q9UII2 106 aa11.44□□□□□ -0.58
ACTN1-219ENST00000556432 RPUSD1Q9UJJ7 312 aaKnown RBP11.44□□□□□ -0.58
ACTN1-219ENST00000556432 TEX13CA0A0J9YWL9 993 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 TMEM120BA0PK00 339 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 A6NLC8 198 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 CTLA4P16410 223 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 CA6P23280 308 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 MRPL19P49406 292 aaKnown RBP11.43□□□□□ -0.58
ACTN1-219ENST00000556432 CENPAP49450 140 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 KLRD1Q13241 179 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 LY6EQ16553 131 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 FOXB2Q5VYV0 432 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 WDR93Q6P2C0 686 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 EPGNQ6UW88 154 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 OAFQ86UD1 273 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 GLB1L2Q8IW92 636 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 LRRC75AQ8NAA5 344 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 OR13C2Q8NGS9 318 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 PPP1R35Q8TAP8 253 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 ADAT1Q9BUB4 502 aaKnown RBP11.43□□□□□ -0.58
ACTN1-219ENST00000556432 MMP28Q9H239 520 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 C1orf123Q9NWV4 160 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 BAG5Q9UL15 447 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 AURKCQ9UQB9 309 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 NOP16Q9Y3C1 178 aaKnown RBP11.43□□□□□ -0.58
ACTN1-219ENST00000556432 ADAM18Q9Y3Q7 739 aa11.43□□□□□ -0.58
ACTN1-219ENST00000556432 COL7A1Q02388 2944 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 IGHV3OR15-7A0A075B7D8 119 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 A0A1B0GWJ7 208 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 EFCAB9A8MZ26 197 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 H3BUX3 64 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 SLC16A7O60669 478 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 FBXO24O75426 580 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 SAA4P35542 130 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 OR1E2P47887 323 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 SLC9A3P48764 834 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 DLX1P56177 255 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 LSM6P62312 80 aaKnown RBP11.42□□□□□ -0.58
ACTN1-219ENST00000556432 EMX1Q04741 257 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-219ENST00000556432 MALLQ13021 153 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 GK2Q14410 553 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-219ENST00000556432 MESTQ5EB52 335 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 DEFB121Q5J5C9 76 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 CCBE1Q6UXH8 406 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-219ENST00000556432 PGAP1Q75T13 922 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 MRPL21Q7Z2W9 205 aaKnown RBP11.42□□□□□ -0.58
ACTN1-219ENST00000556432 CALHM3Q86XJ0 350 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 FAM90A1Q86YD7 464 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 PNKDQ8N490 385 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 OR4F17Q8NGA8 305 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 OR10A6Q8NH74 314 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 LRRC8CQ8TDW0 803 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 SLCO4A1Q96BD0 722 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 Q96M85 177 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 ZNF570Q96NI8 536 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 WWC2-AS2Q96NR7 200 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 OR4F4Q96R69 305 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 CGREF1Q99674 301 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 HDHD2Q9H0R4 259 aa11.42□□□□□ -0.58
ACTN1-219ENST00000556432 COA3Q9Y2R0 106 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-219ENST00000556432 PRSS37A4D1T9 235 aa11.41□□□□□ -0.58
ACTN1-219ENST00000556432 KHDRBS3O75525 346 aaKnown RBP11.41□□□□□ -0.58
ACTN1-219ENST00000556432 GRPP07492 148 aa11.41□□□□□ -0.58
ACTN1-219ENST00000556432 IFNA8P32881 189 aa11.41□□□□□ -0.58
ACTN1-219ENST00000556432 KIR2DS4P43632 304 aa11.41□□□□□ -0.58
ACTN1-219ENST00000556432 C11orf91Q3C1V1 193 aa11.41□□□□□ -0.58
ACTN1-219ENST00000556432 NRMQ8IXM6 262 aa11.41□□□□□ -0.58
ACTN1-219ENST00000556432 FGFRL1Q8N441 504 aa11.41□□□□□ -0.58
ACTN1-219ENST00000556432 GJC3Q8NFK1 279 aa11.41□□□□□ -0.58
ACTN1-219ENST00000556432 COQ7Q99807 217 aa11.41□□□□□ -0.58
ACTN1-219ENST00000556432 NDEL1Q9GZM8 345 aa11.41□□□□□ -0.58
ACTN1-219ENST00000556432 SYT4Q9H2B2 425 aa11.41□□□□□ -0.58
ACTN1-219ENST00000556432 KAT8Q9H7Z6 458 aaKnown RBP11.41□□□□□ -0.58
ACTN1-219ENST00000556432 NKIRAS1Q9NYS0 192 aa11.41□□□□□ -0.58
ACTN1-219ENST00000556432 RPS6KA6Q9UK32 745 aa11.41□□□□□ -0.58
ACTN1-219ENST00000556432 RAB21Q9UL25 225 aa11.41□□□□□ -0.58
ACTN1-219ENST00000556432 F5H5K5 113 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms