RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 PWWP2BQ6NUJ5 590 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 MTFR2Q6P444 385 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 FAM199XQ6PEV8 388 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 KCTD18Q6PI47 426 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 PRSS41Q7RTY9 318 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 NUP54Q7Z3B4 507 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 ZNF584Q8IVC4 421 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SERPINA12Q8IW75 414 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 CDH26Q8IXH8 852 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 ARL14Q8N4G2 192 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SPEM1Q8N4L4 309 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 BCORP1Q8N888 145 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 NKAIN3Q8N8D7 197 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 GATSQ8NAP1 163 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 NPEPL1Q8NDH3 523 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 OR6N1Q8NGY5 312 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 RPS4Y2Q8TD47 263 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SLC37A2Q8TED4 501 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 DPF1Q92782 380 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 TMEM106AQ96A25 262 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 FAM131CQ96AQ9 280 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 ANKRD9Q96BM1 317 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 C3orf49Q96BT1 292 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 CTHRC1Q96CG8 243 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SLC25A38Q96DW6 304 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 MMABQ96EY8 250 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 Q96M85 177 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 VSTM2LQ96N03 204 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 TRIB1Q96RU8 372 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 TBL1XR1Q9BZK7 514 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 ARL6Q9H0F7 186 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 ATG5Q9H1Y0 275 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SLCO5A1Q9H2Y9 848 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SCPEP1Q9HB40 452 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 IL21RQ9HBE5 538 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 APMAPQ9HDC9 416 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 C12orf4Q9NQ89 552 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 IFT46Q9NQC8 304 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SLC17A5Q9NRA2 495 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SERTAD4Q9NUC0 356 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 SDHAF2Q9NX18 166 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 COPS7AQ9UBW8 275 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 EPHA6Q9UF33 1036 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 OR5V1Q9UGF6 321 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 PILRAQ9UKJ1 303 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 FBXL3Q9UKT7 428 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 COPS3Q9UNS2 423 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 FLVCR2Q9UPI3 526 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 PLCL2Q9UPR0 1127 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 PRELID1Q9Y255 219 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 MRPS2Q9Y399 296 aaKnown RBP3.93□□□□□ -1.78
ATXN3-241ENST00000556374 PCDH15Q96QU1 1955 aa3.93□□□□□ -1.78
ATXN3-241ENST00000556374 NOTCH2Q04721 2471 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 TRAV36DV7A0A075B6V5 113 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 TRAV18A0A075B6X5 111 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 A0A087WV48 116 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 A0A0D9SG52 128 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 RPS10-NUDT3A0A1W2PQS6 291 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 TCRBV21S2A2A0A5A6 115 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 A6NCN8 305 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 OR6C68A6NDL8 312 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 GGT3PA6NGU5 568 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 FRG2CA6NGY1 282 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 TVP23AA6NH52 213 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 A6NIZ1 184 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 OR6C65A6NJZ3 312 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 HMSDA8MTL9 139 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 C17orf105B2RV13 164 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 SLC17A2O00624 439 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 CDX4O14627 284 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-241ENST00000556374 TSPAN4O14817 238 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 MAGEB4O15481 346 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-241ENST00000556374 KCNAB3O43448 404 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 NUDT21O43809 227 aaKnown RBP3.92□□□□□ -1.78
ATXN3-241ENST00000556374 UTS2O95399 124 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 AHSA1O95433 338 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 NSA2O95478 260 aaKnown RBP3.92□□□□□ -1.78
ATXN3-241ENST00000556374 RAB3DO95716 219 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 SEMA4FO95754 770 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 IL33O95760 270 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 TXNDC12O95881 172 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 CYB5AP00167 134 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 MT-ATP6P00846 226 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 IGKV1D-16P01601 117 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 ACSM4P0C7M7 580 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 ST6GAL1P15907 406 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 ZNF823P16415 610 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 ANXA7P20073 488 aaKnown RBP3.92□□□□□ -1.78
ATXN3-241ENST00000556374 CD34P28906 385 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 CRABP1P29762 137 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 HOXA6P31267 233 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 DCTDP32321 178 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 GALNSP34059 522 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 AQP2P41181 271 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 ACAA2P42765 397 aaKnown RBP3.92□□□□□ -1.78
ATXN3-241ENST00000556374 RAD52P43351 418 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 POLR2HP52434 150 aaKnown RBP3.92□□□□□ -1.78
ATXN3-241ENST00000556374 HCCSP53701 268 aa3.92□□□□□ -1.78
ATXN3-241ENST00000556374 ZP1P60852 638 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms