RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PHLPP2Q6ZVD8 1323 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 DENND4AQ7Z401 1863 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 AHDC1Q5TGY3 1603 aaPredicted RBP1.58□□□□□ -2.16
SCFD1-218ENST00000556256 IGHV3OR16-9A0A0B4J2B5 98 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 TSPAN11A1L157 253 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 M0R3G1 203 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 BCKDKO14874 412 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 HLA-DQA1P01909 254 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 OR56A5P0C7T3 313 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF286BP0CG31 522 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 PGA5P0DJD9 388 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 C1GALT1C1LP0DN25 315 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 USF1P22415 310 aaPredicted RBP1.57□□□□□ -2.16
SCFD1-218ENST00000556256 NPY1RP25929 384 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 HMOX2P30519 316 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 OPRK1P41145 380 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 FABP6P51161 128 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 CLDN18P56856 261 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 RPS23P62266 143 aaKnown RBP1.57□□□□□ -2.16
SCFD1-218ENST00000556256 CRADDP78560 199 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF816Q0VGE8 651 aaPredicted RBP1.57□□□□□ -2.16
SCFD1-218ENST00000556256 CDC20Q12834 499 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 LY6EQ16553 131 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 BEX5Q5H9J7 111 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 TCEAL5Q5H9L2 206 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 GCSAMLQ5JQS6 135 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 CLEC2AQ6UVW9 174 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 SHISA6Q6ZSJ9 500 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 MRPL55Q7Z7F7 128 aaKnown RBP1.57□□□□□ -2.16
SCFD1-218ENST00000556256 WDFY1Q8IWB7 410 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 KATNAL2Q8IYT4 538 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 LGI3Q8N145 548 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 CBR4Q8N4T8 237 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 COMMD1Q8N668 190 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF615Q8N8J6 731 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 NECAP1Q8NC96 275 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 OR10W1Q8NGF6 305 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 OR6Q1Q8NGQ2 317 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 SYNPRQ8TBG9 265 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 OR51E1Q8TCB6 317 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 TCEAL3Q969E4 200 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 RPEQ96AT9 228 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 BTN2A3PQ96KV6 586 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF488Q96MN9 340 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF442Q9H7R0 627 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 CCNB1IP1Q9NPC3 277 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 MED4Q9NPJ6 270 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 C8orf17Q9NRJ1 99 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF835Q9Y2P0 537 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 HYOU1Q9Y4L1 999 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 WIF1Q9Y5W5 379 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 SAR1BQ9Y6B6 198 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 UBN2Q6ZU65 1347 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 PCDH11XQ9BZA7 1347 aa1.57□□□□□ -2.16
SCFD1-218ENST00000556256 IGHV3-72A0A0B4J1Y9 119 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 C5orf63A6NC05 138 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 KRBOX1C9JBD0 128 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 GABRPO00591 440 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 NME4O00746 187 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 PLPP1O14494 284 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 CASQ2O14958 399 aaPredicted RBP1.56□□□□□ -2.16
SCFD1-218ENST00000556256 ZBTB5O15062 677 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 CCNE2O96020 404 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 IGKV1-17P01599 117 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 ASGR1P07306 291 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 PGA4P0DJD7 388 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 PGA3P0DJD8 388 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 LOXP28300 417 aaPredicted RBP1.56□□□□□ -2.16
SCFD1-218ENST00000556256 PFN2P35080 140 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 BMI1P35226 326 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 RBM34P42696 430 aaKnown RBP1.56□□□□□ -2.16
SCFD1-218ENST00000556256 SLC11A1P49279 550 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 CDKN2DP55273 166 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 UBE2MP61081 183 aaKnown RBP1.56□□□□□ -2.16
SCFD1-218ENST00000556256 RPS15AP62244 130 aaKnown RBP1.56□□□□□ -2.16
SCFD1-218ENST00000556256 RPL23P62829 140 aaKnown RBP1.56□□□□□ -2.16
SCFD1-218ENST00000556256 CDK5Q00535 292 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 RPEL1Q2QD12 228 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 TRMT5Q32P41 509 aaKnown RBP1.56□□□□□ -2.16
SCFD1-218ENST00000556256 COX19Q49B96 90 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 KRTAP13-2Q52LG2 175 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 MPV17L2Q567V2 206 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 RNASE13Q5GAN3 156 aaKnown RBP1.56□□□□□ -2.16
SCFD1-218ENST00000556256 ADNP2Q6IQ32 1131 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF880Q6PDB4 577 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 IGFL1Q6UW32 110 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 C12orf54Q6X4T0 127 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 FAM122BQ7Z309 247 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 SNX20Q7Z614 316 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 HMGN2P46Q86SG4 172 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 HORMAD1Q86X24 394 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF547Q8IVP9 402 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 NKAIN4Q8IVV8 208 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 OSR2Q8N2R0 312 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 BPIFCQ8NFQ6 507 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 OR5AR1Q8NGP9 310 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 OR10G6Q8NH81 332 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 LINC01560Q8TB33 94 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 GLYATL2Q8WU03 294 aa1.56□□□□□ -2.16
SCFD1-218ENST00000556256 RBMXL1Q96E39 390 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms