RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 ONECUT2O95948 504 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 ZNF20P17024 532 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 TAS2R31P59538 309 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 MYBPHQ13203 477 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 EIF3IQ13347 325 aaKnown RBP11.99□□□□□ -0.49
SHMT2-222ENST00000555774 ZNF239Q16600 458 aaKnown RBP11.99□□□□□ -0.49
SHMT2-222ENST00000555774 C3orf33Q6P1S2 294 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 PGAP1Q75T13 922 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 OR4S1Q8NGB4 309 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 OR10R2Q8NGX6 335 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 OR2AJ1Q8NGZ0 328 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 NKD1Q969G9 470 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 PMEPA1Q969W9 287 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 RELTQ969Z4 430 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 RASL12Q9NYN1 266 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 FBXL2Q9UKC9 423 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 ANAPC10Q9UM13 185 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 B3GALT1Q9Y5Z6 326 aa11.99□□□□□ -0.49
SHMT2-222ENST00000555774 MYO9BQ13459 2157 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 C9orf170A2RU37 121 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 H3BML4 177 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 ZFAND5O76080 213 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 STK17BO94768 372 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 SPDEFO95238 335 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 CYC1P08574 325 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 PGA4P0DJD7 388 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 PGA3P0DJD8 388 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 PNLIPP16233 465 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 FKBP2P26885 142 aaKnown RBP11.98□□□□□ -0.49
SHMT2-222ENST00000555774 CD96P40200 585 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 KCNMB1Q16558 191 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 SMUG1Q53HV7 270 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 ACTBL2Q562R1 376 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 AWAT2Q6E213 333 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 PXT1Q8NFP0 134 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 POC1BQ8TC44 478 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 WDR77Q9BQA1 342 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-222ENST00000555774 FBXO4Q9UKT5 387 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 WIF1Q9Y5W5 379 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 POM121CA8CG34 1229 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 EFNA2O43921 213 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 RLN2P04090 185 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 GSTP1P09211 210 aaKnown RBP11.98□□□□□ -0.49
SHMT2-222ENST00000555774 ZNF93P35789 620 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-222ENST00000555774 CASRP41180 1078 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 PTGDSP41222 190 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 EMP2P54851 167 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 NKPD1Q17RQ9 610 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 JMJD6Q6NYC1 403 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-222ENST00000555774 SLC25A47Q6Q0C1 308 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 ACOT7LQ6ZUV0 252 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 CD163Q86VB7 1156 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 OR6X1Q8NH79 312 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 SLC22A8Q8TCC7 542 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 ELP5Q8TE02 316 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 THAP3Q8WTV1 239 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-222ENST00000555774 SLC25A43Q8WUT9 341 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-222ENST00000555774 EMC6Q9BV81 110 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 DUSP15Q9H1R2 295 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-222ENST00000555774 LHFPL6Q9Y693 200 aa11.98□□□□□ -0.49
SHMT2-222ENST00000555774 UNC80Q8N2C7 3258 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 NAT1P18440 290 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 CCL1P22362 96 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 P2RY4P51582 365 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 DCDP81605 110 aaKnown RBP11.97□□□□□ -0.49
SHMT2-222ENST00000555774 PPP1R1AQ13522 171 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 TUSC1Q2TAM9 212 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 CFAP77Q6ZQR2 320 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 C17orf107Q6ZR85 190 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 OR13C9Q8NGT0 318 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 MRGPRFQ96AM1 343 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 CST11Q9H112 138 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 PTGES2Q9H7Z7 377 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 METTL7AQ9H8H3 244 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 C19orf25Q9UFG5 118 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-222ENST00000555774 ZNF230Q9UIE0 474 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-222ENST00000555774 POLR1DQ9Y2S0 133 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 EXPH5Q8NEV8 1989 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 XIRP2A4UGR9 3374 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 LOC102725191A0A1B0GVB3 256 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 TRAF3IP2O43734 574 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-222ENST00000555774 IFNA6P05013 189 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 CSN2P05814 226 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 HOXD11P31277 338 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-222ENST00000555774 IL13RA1P78552 427 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 FOXK1P85037 733 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 PNLIPRP3Q17RR3 467 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 TMEM81Q6P7N7 255 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 TMPRSS9Q7Z410 1059 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 CPEB2Q7Z5Q1 589 aaKnown RBP11.97□□□□□ -0.49
SHMT2-222ENST00000555774 ANGPTL5Q86XS5 388 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 LHFPL5Q8TAF8 219 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 NUDCD2Q8WVJ2 157 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 OXGR1Q96P68 337 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 C1QTNF6Q9BXI9 259 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 FOXQ1Q9C009 403 aa11.97□□□□□ -0.49
SHMT2-222ENST00000555774 SCRG1O75711 98 aa11.96□□□□□ -0.49
SHMT2-222ENST00000555774 DUS4LO95620 317 aaKnown RBP11.96□□□□□ -0.49
SHMT2-222ENST00000555774 NR2C1P13056 603 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms