RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 MYPOPQ86VE0 399 aaPredicted RBP8.88□□□□□ -0.99
SRP54-208ENST00000555557 NDNFQ8TB73 568 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 ORAI1Q96D31 301 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 ZNF799Q96GE5 643 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 PPIL3Q9H2H8 161 aaKnown RBP8.88□□□□□ -0.99
SRP54-208ENST00000555557 PIGMQ9H3S5 423 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 TXNL4BQ9NX01 149 aaKnown RBP8.88□□□□□ -0.99
SRP54-208ENST00000555557 SSR3Q9UNL2 185 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 ZNF281Q9Y2X9 895 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 A0A1W2PPW3 197 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 C5orf49A4QMS7 147 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 TTRP02766 147 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 HLA-DPB1P04440 258 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 CELA3BP08861 270 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 STOMP27105 288 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 OTX1P32242 354 aaPredicted RBP8.88□□□□□ -0.99
SRP54-208ENST00000555557 ARR3P36575 388 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 CCR9P51686 369 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 ADORA2A-AS1P86434 159 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 GFOD2Q3B7J2 385 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 TIMM50Q3ZCQ8 353 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 ACSM3Q53FZ2 586 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 BCL2L15Q5TBC7 163 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 TMEM53Q6P2H8 277 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 CD200R1LQ6Q8B3 271 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 CEACAM19Q7Z692 300 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 MRGPRGQ86SM5 289 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 OR8B12Q8NGG6 310 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 HAVCR2Q8TDQ0 301 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 NANOS1Q8WY41 292 aaKnown RBP8.88□□□□□ -0.99
SRP54-208ENST00000555557 SPTSSAQ969W0 71 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 S100PBPQ96BU1 408 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 ZNF75AQ96N20 296 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 OR14A2Q96R54 314 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 COQ7Q99807 217 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 SOX7Q9BT81 388 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 WACQ9BTA9 647 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 DCUN1D5Q9BTE7 237 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 COMMD4Q9H0A8 199 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 NIPAL2Q9H841 368 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 SLC17A5Q9NRA2 495 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 PRR14LQ5THK1 2151 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 TRDV1A0A1B0GX56 115 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 TMEM212A6NML5 194 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 P2RY10O00398 339 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 RGS9O75916 674 aaPredicted RBP8.87□□□□□ -0.99
SRP54-208ENST00000555557 CD1AP06126 327 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 ACSM4P0C7M7 580 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 IL32P24001 234 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 PCSK6P29122 969 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 HOXC12P31275 282 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 SOX2P48431 317 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 TPTEP56180 551 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 PLP2Q04941 152 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 ECH1Q13011 328 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 CDSNQ15517 529 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 SNAI3Q3KNW1 292 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 KRTAP27-1Q3LI81 207 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 C22orf34Q6ZV56 151 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 ELMOD2Q8IZ81 293 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 MS4A15Q8N5U1 240 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 C1orf162Q8NEQ5 155 aaPredicted RBP8.87□□□□□ -0.99
SRP54-208ENST00000555557 CCDC120Q96HB5 630 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 JKAMPQ9P055 326 aa8.87□□□□□ -0.99
SRP54-208ENST00000555557 IQCMA0A1B0GVH7 501 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 SHISA3A0PJX4 238 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 ANKRD61A6NGH8 418 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 ACOD1A6NK06 481 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 OR5H1A6NKK0 313 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 ZNF701M0R085 212 aaPredicted RBP8.86□□□□□ -0.99
SRP54-208ENST00000555557 TBX1O43435 398 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 GPRIN2O60269 458 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 SC5DO75845 299 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 LCATP04180 440 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 ZNF182P17025 639 aaPredicted RBP8.86□□□□□ -0.99
SRP54-208ENST00000555557 CD53P19397 219 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 PSMB1P20618 241 aaKnown RBP8.86□□□□□ -0.99
SRP54-208ENST00000555557 IDH3GP51553 393 aaPredicted RBP8.86□□□□□ -0.99
SRP54-208ENST00000555557 PRSS12P56730 875 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 ESPL1Q14674 2120 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 YIF1BQ5BJH7 314 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 ZNF544Q6NX49 715 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 PAQR4Q8N4S7 273 aaPredicted RBP8.86□□□□□ -0.99
SRP54-208ENST00000555557 OR51E1Q8TCB6 317 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 PGAM5Q96HS1 289 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 BOD1Q96IK1 185 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 POM121L2Q96KW2 1035 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 PLGRKTQ9HBL7 147 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 NUFIP1Q9UHK0 495 aaKnown RBP8.86□□□□□ -0.99
SRP54-208ENST00000555557 ARPC4-TTLL3A0A0A6YYG9 625 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 LOC107986453A0A1B0GWG9 222 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 SMIM30A4D0T7 59 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 A6NIN4 97 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 FAM90A27PA6NNH2 459 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 PIN1P1O15428 100 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 LMX1BO60663 402 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 SERPINA5P05154 406 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 OCM2P0CE71 109 aa8.86□□□□□ -0.99
SRP54-208ENST00000555557 HOXB1P14653 301 aaPredicted RBP8.86□□□□□ -0.99
SRP54-208ENST00000555557 ZNF14P17017 642 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms