RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 DAPP51397 102 aa17.35■□□□□ 0.37
VTI1B-205ENST00000555543 GK2Q14410 553 aaPredicted RBP17.35■□□□□ 0.37
VTI1B-205ENST00000555543 ATP6AP1Q15904 470 aa17.35■□□□□ 0.37
VTI1B-205ENST00000555543 SNAI3Q3KNW1 292 aa17.35■□□□□ 0.37
VTI1B-205ENST00000555543 PLBD1Q6P4A8 553 aa17.35■□□□□ 0.37
VTI1B-205ENST00000555543 SPATC1Q76KD6 591 aa17.35■□□□□ 0.37
VTI1B-205ENST00000555543 OR8G5Q8NG78 346 aa17.35■□□□□ 0.37
VTI1B-205ENST00000555543 OR10AD1Q8NGE0 317 aa17.35■□□□□ 0.37
VTI1B-205ENST00000555543 ITLN1Q8WWA0 313 aa17.35■□□□□ 0.37
VTI1B-205ENST00000555543 SPTSSAQ969W0 71 aa17.35■□□□□ 0.37
VTI1B-205ENST00000555543 NRBF2Q96F24 287 aa17.35■□□□□ 0.37
VTI1B-205ENST00000555543 COPS4Q9BT78 406 aa17.35■□□□□ 0.37
VTI1B-205ENST00000555543 MARCH7Q9H992 704 aa17.35■□□□□ 0.37
VTI1B-205ENST00000555543 KIF17Q9P2E2 1029 aa17.35■□□□□ 0.37
VTI1B-205ENST00000555543 IQCF6A8MYZ5 107 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 GLCEO94923 617 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 GSTT1P30711 240 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 SLC6A9P48067 706 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 BLVRAP53004 296 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 FAM120AOSQ5T036 256 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 ASRGL1Q7L266 308 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 ZNF771Q7L3S4 317 aaPredicted RBP17.34■□□□□ 0.37
VTI1B-205ENST00000555543 DPY19L4Q7Z388 723 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 ERI1Q8IV48 349 aaKnown RBP17.34■□□□□ 0.37
VTI1B-205ENST00000555543 OR6N2Q8NGY6 317 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 OR5K1Q8NHB7 308 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 ZMYND19Q96E35 227 aaPredicted RBP17.34■□□□□ 0.37
VTI1B-205ENST00000555543 OR2V2Q96R30 315 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 INTS14Q96SY0 518 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 BEX2Q9BXY8 128 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 SHARPINQ9H0F6 387 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 OR51V1Q9H2C8 321 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 SLC25A19Q9HC21 320 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 PAPOLBQ9NRJ5 636 aaKnown RBP17.34■□□□□ 0.37
VTI1B-205ENST00000555543 CENPMQ9NSP4 180 aa17.34■□□□□ 0.37
VTI1B-205ENST00000555543 PRR23D1E9PI22 279 aaPredicted RBP17.33■□□□□ 0.36
VTI1B-205ENST00000555543 H0YL77 283 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 MLNRO43193 412 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 HMGN1P05114 100 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 PRR23D2P0DMB1 279 aaPredicted RBP17.33■□□□□ 0.36
VTI1B-205ENST00000555543 SLC2A1P11166 492 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 PAICSP22234 425 aaKnown RBP17.33■□□□□ 0.36
VTI1B-205ENST00000555543 TNFSF4P23510 183 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 PRKXP51817 358 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 EIF2B1Q14232 305 aaKnown RBP17.33■□□□□ 0.36
VTI1B-205ENST00000555543 CR1LQ2VPA4 569 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 CPOQ8IVL8 374 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 TIGD4Q8IY51 512 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 BBS1Q8NFJ9 593 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 OR2AE1Q8NHA4 323 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 DUS3LQ96G46 650 aaKnown RBP17.33■□□□□ 0.36
VTI1B-205ENST00000555543 ZNF582Q96NG8 517 aaPredicted RBP17.33■□□□□ 0.36
VTI1B-205ENST00000555543 AMELYQ99218 206 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 SLC30A2Q9BRI3 323 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 ZNF665Q9H7R5 613 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 LPAR2Q9HBW0 351 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 IL19Q9UHD0 177 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 AP4S1Q9Y587 144 aa17.33■□□□□ 0.36
VTI1B-205ENST00000555543 ERICH4A6NGS2 130 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 B4DSR2 109 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 ZNF878C9JN71 531 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 FAM157CP0CG43 387 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 CRISP1P54107 249 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 MALLQ13021 153 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 DRAM2Q6UX65 266 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 AMIGO2Q86SJ2 522 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 PARP8Q8N3A8 854 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 ZNF283Q8N7M2 679 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 DNAJC9Q8WXX5 260 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 LRTOMTQ8WZ04 291 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 RAB1CQ92928 201 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 TIMD4Q96H15 378 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 KCNJ15Q99712 375 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 ABHD6Q9BV23 337 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 LPAR3Q9UBY5 353 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 DYSFO75923 2080 aa17.32■□□□□ 0.36
VTI1B-205ENST00000555543 A0A1B0GWJ7 208 aa17.31■□□□□ 0.36
VTI1B-205ENST00000555543 SELENOFO60613 162 aa17.31■□□□□ 0.36
VTI1B-205ENST00000555543 MITFO75030 526 aaPredicted RBP17.31■□□□□ 0.36
VTI1B-205ENST00000555543 IGHV2-5P01817 119 aa17.31■□□□□ 0.36
VTI1B-205ENST00000555543 TNFRSF1AP19438 455 aa17.31■□□□□ 0.36
VTI1B-205ENST00000555543 SLC2A5P22732 501 aa17.31■□□□□ 0.36
VTI1B-205ENST00000555543 DVL1P1P54792 670 aaPredicted RBP17.31■□□□□ 0.36
VTI1B-205ENST00000555543 ZNF92Q03936 586 aa17.31■□□□□ 0.36
VTI1B-205ENST00000555543 TAF13Q15543 124 aa17.31■□□□□ 0.36
VTI1B-205ENST00000555543 KLHL12Q53G59 568 aa17.31■□□□□ 0.36
VTI1B-205ENST00000555543 GLYATL3Q5SZD4 288 aa17.31■□□□□ 0.36
VTI1B-205ENST00000555543 PGAP1Q75T13 922 aa17.31■□□□□ 0.36
VTI1B-205ENST00000555543 OR13G1Q8NGZ3 307 aa17.31■□□□□ 0.36
VTI1B-205ENST00000555543 RNF133Q8WVZ7 376 aa17.31■□□□□ 0.36
VTI1B-205ENST00000555543 MEGF10Q96KG7 1140 aa17.31■□□□□ 0.36
VTI1B-205ENST00000555543 TMEM106BQ9NUM4 274 aa17.31■□□□□ 0.36
VTI1B-205ENST00000555543 IGHV3-64DA0A0J9YX35 117 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 ISPDA4D126 451 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 F5H5P2 479 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 PRODHO43272 600 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 CIB2O75838 187 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 HLA-DPB1P04440 258 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 MSMBP08118 114 aa17.3■□□□□ 0.36
VTI1B-205ENST00000555543 SELEP16581 610 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms