RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 OR52N5Q8NH56 324 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 RPS4Y2Q8TD47 263 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ASB10Q8WXI3 467 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 RASD2Q96D21 266 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF837Q96EG3 531 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-213ENST00000555386 CMTM3Q96MX0 182 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 WFIKKN1Q96NZ8 548 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 MNTQ99583 582 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 C1QTNF6Q9BXI9 259 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ZCCHC4Q9H5U6 513 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 RNF121Q9H920 327 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 CRLF2Q9HC73 371 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ABRACLQ9P1F3 81 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 NDRG3Q9UGV2 375 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 RCE1Q9Y256 329 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 RTTNQ86VV8 2226 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ABCA12Q86UK0 2595 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ARPC4-TTLL3A0A0A6YYG9 625 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 TEX13CA0A0J9YWL9 993 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 SMIM30A4D0T7 59 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ARHGEF9O43307 516 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 NCR1O76036 304 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF432O94892 652 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 TFP02787 698 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 GYPBP06028 91 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 CD14P08571 375 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 SPI1P17947 270 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ELK1P19419 428 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 THBS2P35442 1172 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 NR4A2P43354 598 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 INPP1P49441 399 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 GDI2P50395 445 aaKnown RBP8.64□□□□□ -1.03
PSEN1-213ENST00000555386 RPL27P61353 136 aaKnown RBP8.64□□□□□ -1.03
PSEN1-213ENST00000555386 SLC3A1Q07837 685 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 INSL4Q14641 139 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 P2RY6Q15077 328 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 CEACAM16Q2WEN9 425 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 OXLD1Q5BKU9 147 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 PLET1Q6UQ28 207 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 NHLRC1Q6VVB1 395 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 C22orf34Q6ZV56 151 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 C20orf196Q8IYI0 205 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF433Q8N7K0 673 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-213ENST00000555386 LRRC75AQ8NAA5 344 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 SNX33Q8WV41 574 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 NSMAFQ92636 917 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 GHSRQ92847 366 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ZMYND19Q96E35 227 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-213ENST00000555386 PELI1Q96FA3 418 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 SLC25A44Q96H78 314 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-213ENST00000555386 Q96M85 177 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 TSPAN32Q96QS1 320 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 SNX18Q96RF0 628 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ULBP2Q9BZM5 246 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 TXNIPQ9H3M7 391 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 GPR35Q9HC97 309 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 B3GAT2Q9NPZ5 323 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 EXTL2Q9UBQ6 330 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 GRHPRQ9UBQ7 328 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 MALT1Q9UDY8 824 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 TACC2O95359 2948 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 SETXQ7Z333 2677 aaKnown RBP8.63□□□□□ -1.03
PSEN1-213ENST00000555386 A0A0G2JK05 382 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 NOTOA8MTQ0 251 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF879B4DU55 563 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 LYRM1O43325 122 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 IGHG1P01857 330 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 QDPRP09417 244 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 UCHL1P09936 223 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 RAB3BP20337 219 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 PSMB1P20618 241 aaKnown RBP8.63□□□□□ -1.03
PSEN1-213ENST00000555386 MPGP29372 298 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 SDHAP31040 664 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 PITPNBP48739 271 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 ARF1P84077 181 aaKnown RBP8.63□□□□□ -1.03
PSEN1-213ENST00000555386 SORDQ00796 357 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 FMODQ06828 376 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 DBPQ10586 325 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-213ENST00000555386 P2RY14Q15391 338 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 CARTPTQ16568 116 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 HIKESHIQ53FT3 197 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 GPR139Q6DWJ6 353 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 PYHIN1Q6K0P9 492 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 UNQ9370/PRO34162Q6UXP9 181 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 SSX6Q7RTT6 188 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 FAM122BQ7Z309 247 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 ABHD12BQ7Z5M8 362 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-213ENST00000555386 JAZF1Q86VZ6 243 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 NR2C2APQ86WQ0 139 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 STEAP2Q8NFT2 490 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 OR6X1Q8NH79 312 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF486Q96H40 463 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-213ENST00000555386 ADAD1Q96M93 576 aaKnown RBP8.63□□□□□ -1.03
PSEN1-213ENST00000555386 FOXN4Q96NZ1 517 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 NMNAT3Q96T66 252 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 NEK6Q9HC98 313 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 GLTPQ9NZD2 209 aa8.63□□□□□ -1.03
PSEN1-213ENST00000555386 SPG11Q96JI7 2443 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 OR6C68A6NDL8 312 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 OR6C65A6NJZ3 312 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms