RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 WNT5AP41221 380 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 SLC6A9P48067 706 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 GGTLC2Q14390 218 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 LRRC36Q1X8D7 754 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 KRTAP27-1Q3LI81 207 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 OTPQ5XKR4 325 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 COLCA1Q6ZS62 124 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 ZNF771Q7L3S4 317 aaPredicted RBP9.09□□□□□ -0.95
TMEM260-206ENST00000555046 KRT77Q7Z794 578 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 ZNF101Q8IZC7 436 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 GALNT4Q8N4A0 578 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 ZNF540Q8NDQ6 660 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 SETD9Q8NE22 299 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 OR52H1Q8NGJ2 320 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 SLC25A40Q8TBP6 338 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 ST7LQ8TDW4 575 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 MRPL48Q96GC5 212 aaKnown RBP9.09□□□□□ -0.95
TMEM260-206ENST00000555046 ZNF799Q96GE5 643 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 ZNF582Q96NG8 517 aaPredicted RBP9.09□□□□□ -0.95
TMEM260-206ENST00000555046 SYT3Q9BQG1 590 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 RHNO1Q9BSD3 238 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 OR2J1Q9GZK6 312 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 HEATR1Q9H583 2144 aaKnown RBP9.09□□□□□ -0.95
TMEM260-206ENST00000555046 PNRC2Q9NPJ4 139 aaKnown RBP9.09□□□□□ -0.95
TMEM260-206ENST00000555046 FAM118AQ9NWS6 357 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 NKIRAS2Q9NYR9 191 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 ZDHHC8Q9ULC8 765 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 STARD10Q9Y365 291 aa9.09□□□□□ -0.95
TMEM260-206ENST00000555046 NOP16Q9Y3C1 178 aaKnown RBP9.09□□□□□ -0.95
TMEM260-206ENST00000555046 PLCE1Q9P212 2302 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 ZANQ9Y493 2812 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 ZNF670-ZNF695F2Z2N8 137 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 TIMM8AO60220 97 aaPredicted RBP9.08□□□□□ -0.96
TMEM260-206ENST00000555046 DBHP09172 617 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 OR2T7P0C7T2 308 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 TNFSF4P23510 183 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 OTX1P32242 354 aaPredicted RBP9.08□□□□□ -0.96
TMEM260-206ENST00000555046 DCTDP32321 178 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 MRPS11P82912 194 aaKnown RBP9.08□□□□□ -0.96
TMEM260-206ENST00000555046 IL18R1Q13478 541 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 SNCBQ16143 134 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 RSPO1Q2MKA7 263 aaPredicted RBP9.08□□□□□ -0.96
TMEM260-206ENST00000555046 Q5PR19 223 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 CLEC2AQ6UVW9 174 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 FBXW12Q6X9E4 464 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 EGFL6Q8IUX8 553 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 DHRSXQ8N5I4 330 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 ZNF283Q8N7M2 679 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 BBS1Q8NFJ9 593 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 OR2T27Q8NH04 317 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 SLC7A6Q92536 515 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 CMBLQ96DG6 245 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 SMR3AQ99954 134 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 EGLN1Q9GZT9 426 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 SLC22A4Q9H015 551 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 OR10A2Q9H208 303 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 RGCCQ9H4X1 137 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 DECR2Q9NUI1 292 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 ZNF391Q9UJN7 358 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 FZR1Q9UM11 496 aa9.08□□□□□ -0.96
TMEM260-206ENST00000555046 ARID1AO14497 2285 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 USF3Q68DE3 2245 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 CCDC182A6NF36 153 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 C17orf100A8MU93 164 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 H0YAE9 185 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 H0YJX3 145 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 NDUFS8O00217 210 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 XRCC2O43543 280 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 SSX4O60224 188 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 SELENOFO60613 162 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 CLPTM1O96005 669 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 TACSTD2P09758 323 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 SBK2P0C263 348 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 FOSL1P15407 271 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 KITLGP21583 273 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 DDOSTP39656 456 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 OPRL1P41146 370 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 NAA10P41227 235 aaPredicted RBP9.07□□□□□ -0.96
TMEM260-206ENST00000555046 RPS27P42677 84 aaKnown RBP9.07□□□□□ -0.96
TMEM260-206ENST00000555046 MTNR1AP48039 350 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 ZNF81P51508 661 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 PRKXP51817 358 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 ROM1Q03395 351 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 EGR3Q06889 387 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 PSG7Q13046 419 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 CLEC12BQ2HXU8 276 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 SPATA46Q5T0L3 261 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 OGFRL1Q5TC84 451 aaPredicted RBP9.07□□□□□ -0.96
TMEM260-206ENST00000555046 LPCAT4Q643R3 524 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 LYPD4Q6UWN0 246 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 PGAP1Q75T13 922 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 KCTD20Q7Z5Y7 419 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 LRP11Q86VZ4 500 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 SLC35F2Q8IXU6 374 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 ZNF679Q8IYX0 411 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 RHOXF1Q8NHV9 184 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 RNPEPL1Q9HAU8 725 aa9.07□□□□□ -0.96
TMEM260-206ENST00000555046 PURGQ9UJV8 347 aaKnown RBP9.07□□□□□ -0.96
TMEM260-206ENST00000555046 RPL36Q9Y3U8 105 aaKnown RBP9.07□□□□□ -0.96
TMEM260-206ENST00000555046 HSPE1-MOB4S4R3N1 261 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms