RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 TAAR8Q969N4 342 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 ST6GAL2Q96JF0 529 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 MRGPRX4Q96LA9 322 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 C4orf45Q96LM5 186 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 OR8B4Q96RC9 309 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 TTTY10Q9BZA0 68 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 SYT4Q9H2B2 425 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 LDAHQ9H6V9 325 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 PLEKHA1Q9HB21 404 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 NLKQ9UBE8 527 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 B4GALT7Q9UBV7 327 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 ZNF346Q9UL40 294 aaKnown RBP9.82□□□□□ -0.84
SHMT2-216ENST00000554975 BOKQ9UMX3 212 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-216ENST00000554975 ALG5Q9Y673 324 aa9.82□□□□□ -0.84
SHMT2-216ENST00000554975 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.82□□□□□ -0.842e-7■■■■■ 36.5
SHMT2-216ENST00000554975 IGLV3-32A0A0A0MS00 114 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 C7orf66A4D0T2 115 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 TUBAL3A6NHL2 446 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 GABARAPH6UMI1 98 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 ETV2O00321 342 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-216ENST00000554975 EEF1E1O43324 174 aaKnown RBP9.81□□□□□ -0.84
SHMT2-216ENST00000554975 UPK3AO75631 287 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 ZFPL1O95159 310 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 S100A1P23297 94 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 PSMB10P40306 273 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 RIDAP52758 137 aaKnown RBP9.81□□□□□ -0.84
SHMT2-216ENST00000554975 ROM1Q03395 351 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 KRTAP1-1Q07627 177 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 PUDPQ08623 228 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 FOXO1Q12778 655 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 GPR176Q14439 515 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 BCL2A1Q16548 175 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 CARTPTQ16568 116 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 ACKR1Q16570 336 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 NOXA1Q86UR1 476 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 ZNF679Q8IYX0 411 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 OR13C5Q8NGS8 318 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 OR2G2Q8NGZ5 317 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 GRPEL2Q8TAA5 225 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 RNF138Q8WVD3 245 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 TSEN15Q8WW01 171 aaKnown RBP9.81□□□□□ -0.84
SHMT2-216ENST00000554975 UPRTQ96BW1 309 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 S100A16Q96FQ6 103 aaKnown RBP9.81□□□□□ -0.84
SHMT2-216ENST00000554975 OR2M2Q96R28 347 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 PDCD1LG2Q9BQ51 273 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 PTDSS2Q9BVG9 487 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 POTEKPQ9BYX7 375 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 SLA2Q9H6Q3 261 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 METTL7AQ9H8H3 244 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 SLC17A5Q9NRA2 495 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 SERINC1Q9NRX5 453 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 PPP4R1LQ9P1A2 415 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 KLHL9Q9P2J3 617 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 CKLFQ9UBR5 152 aa9.81□□□□□ -0.84
SHMT2-216ENST00000554975 MRM2Q9UI43 246 aaKnown RBP9.81□□□□□ -0.84
SHMT2-216ENST00000554975 CHCHD2Q9Y6H1 151 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-216ENST00000554975 TRBV5-7A0A0A0MS05 114 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 A0A1W2PNV4 684 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 OR4C45A6NMZ5 311 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 C11orf98E9PRG8 122 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 PLPP3O14495 311 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 DVL2O14641 736 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 KRT33AO76009 404 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 HLA-DQA2P01906 255 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 C1QBP02746 253 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 SNRPBP14678 240 aaKnown RBP9.8□□□□□ -0.84
SHMT2-216ENST00000554975 FSTP19883 344 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 STOMP27105 288 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 AGFG1P52594 562 aaKnown RBP9.8□□□□□ -0.84
SHMT2-216ENST00000554975 SSBP1Q04837 148 aaKnown RBP9.8□□□□□ -0.84
SHMT2-216ENST00000554975 SLC10A1Q14973 349 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 PLA1AQ53H76 456 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 SLC25A53Q5H9E4 307 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 ELFN2Q5R3F8 820 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 C3orf33Q6P1S2 294 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 DEGS2Q6QHC5 323 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 KRT74Q7RTS7 529 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 PLCZ1Q86YW0 608 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 PM20D2Q8IYS1 436 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 OR6V1Q8N148 313 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 ZNF511Q8NB15 262 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 OR52N5Q8NH56 324 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 CAPSLQ8WWF8 208 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 HGDQ93099 445 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 YIPF5Q969M3 257 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 SLC25A36Q96CQ1 311 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 HAVCR1Q96D42 359 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 PPIL3Q9H2H8 161 aaKnown RBP9.8□□□□□ -0.84
SHMT2-216ENST00000554975 FANCFQ9NPI8 374 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 TAS2R8Q9NYW2 309 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 KLRF1Q9NZS2 232 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 KCNG2Q9UJ96 466 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 B9D1Q9UPM9 204 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 B3GALT5Q9Y2C3 310 aa9.8□□□□□ -0.84
SHMT2-216ENST00000554975 AK6Q9Y3D8 172 aaKnown RBP9.8□□□□□ -0.84
SHMT2-216ENST00000554975 IGLV1-36A0A0B4J1U3 117 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 MEGF11A6BM72 1044 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 ACOD1A6NK06 481 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 SMPD2O60906 423 aa9.79□□□□□ -0.84
SHMT2-216ENST00000554975 KHDRBS3O75525 346 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms