RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 NSD1Q96L73 2696 aaPredicted RBP11.24□□□□□ -0.61
APEX1-208ENST00000554813 ABCA1O95477 2261 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 TLN2Q9Y4G6 2542 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 LOC100289279A0A1B0GTE1 492 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 CLDN25C9JDP6 229 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 APOC1P02654 83 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 PSKH1P11801 424 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 TNFRSF1AP19438 455 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 OTX1P32242 354 aaPredicted RBP11.24□□□□□ -0.61
APEX1-208ENST00000554813 RPS7P62081 194 aaKnown RBP11.24□□□□□ -0.61
APEX1-208ENST00000554813 GRB2P62993 217 aaKnown RBP11.24□□□□□ -0.61
APEX1-208ENST00000554813 GK2Q14410 553 aaPredicted RBP11.24□□□□□ -0.61
APEX1-208ENST00000554813 KPNB1Q14974 876 aaKnown RBP11.24□□□□□ -0.61
APEX1-208ENST00000554813 TRIP10Q15642 601 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 KDM4DQ6B0I6 523 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 OR2T2Q6IF00 324 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 FAM166AQ6J272 317 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 ZFP1Q6P2D0 407 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 PGAP1Q75T13 922 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 CXXC5Q7LFL8 322 aaKnown RBP11.24□□□□□ -0.61
APEX1-208ENST00000554813 PEG10Q86TG7 708 aaKnown RBP11.24□□□□□ -0.61
APEX1-208ENST00000554813 TIGD4Q8IY51 512 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 OR5AS1Q8N127 324 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 ZNF454Q8N9F8 522 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 ST7LQ8TDW4 575 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 PYDC1Q8WXC3 89 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 RAB1CQ92928 201 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 MSI2Q96DH6 328 aaKnown RBP11.24□□□□□ -0.61
APEX1-208ENST00000554813 ZMYND19Q96E35 227 aaPredicted RBP11.24□□□□□ -0.61
APEX1-208ENST00000554813 TIMD4Q96H15 378 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 ABHD6Q9BV23 337 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 OSBPL10Q9BXB5 764 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 GABARAPL1Q9H0R8 117 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 TOR3AQ9H497 397 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 SP140LQ9H930 580 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 IL19Q9UHD0 177 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 ZFHX3Q15911 3703 aa11.24□□□□□ -0.61
APEX1-208ENST00000554813 YLPM1P49750 1951 aaKnown RBP11.23□□□□□ -0.61
APEX1-208ENST00000554813 IQCF6A8MYZ5 107 aa11.23□□□□□ -0.61
APEX1-208ENST00000554813 MITFO75030 526 aaPredicted RBP11.23□□□□□ -0.61
APEX1-208ENST00000554813 CRLF1O75462 422 aa11.23□□□□□ -0.61
APEX1-208ENST00000554813 TGFAP01135 160 aa11.23□□□□□ -0.61
APEX1-208ENST00000554813 IGFBP5P24593 272 aa11.23□□□□□ -0.61
APEX1-208ENST00000554813 HSD11B1P28845 292 aa11.23□□□□□ -0.61
APEX1-208ENST00000554813 PRKXP51817 358 aa11.23□□□□□ -0.61
APEX1-208ENST00000554813 APOFQ13790 326 aa11.23□□□□□ -0.61
APEX1-208ENST00000554813 Q6ZR03 302 aa11.23□□□□□ -0.61
APEX1-208ENST00000554813 SPATC1Q76KD6 591 aa11.23□□□□□ -0.61
APEX1-208ENST00000554813 MRPL21Q7Z2W9 205 aaKnown RBP11.23□□□□□ -0.61
APEX1-208ENST00000554813 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.23□□□□□ -0.61
APEX1-208ENST00000554813 ZNF283Q8N7M2 679 aa11.23□□□□□ -0.61
APEX1-208ENST00000554813 RNF133Q8WVZ7 376 aa11.23□□□□□ -0.61
APEX1-208ENST00000554813 RAB3IPQ96QF0 476 aaPredicted RBP11.23□□□□□ -0.61
APEX1-208ENST00000554813 TEAD3Q99594 435 aa11.23□□□□□ -0.61
APEX1-208ENST00000554813 TMEM100Q9NV29 134 aa11.23□□□□□ -0.61
APEX1-208ENST00000554813 H2AFY2Q9P0M6 372 aaPredicted RBP11.23□□□□□ -0.61
APEX1-208ENST00000554813 OAZ3Q9UMX2 235 aa11.23□□□□□ -0.61
APEX1-208ENST00000554813 LMX1BO60663 402 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 LYNP07948 512 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 H2BFMP0C1H6 154 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 ZNF16P17020 682 aaPredicted RBP11.22□□□□□ -0.61
APEX1-208ENST00000554813 SLC2A5P22732 501 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 MVKQ03426 396 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 SLX4IPQ5VYV7 408 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 LINC01356Q8N9X3 169 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 BHLHE23Q8NDY6 225 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 BBS1Q8NFJ9 593 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 CLDND2Q8NHS1 167 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 OTOSQ8NHW6 89 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 THEM6Q8WUY1 208 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 SPRYD4Q8WW59 207 aaPredicted RBP11.22□□□□□ -0.61
APEX1-208ENST00000554813 RBM4BQ9BQ04 359 aaKnown RBP11.22□□□□□ -0.61
APEX1-208ENST00000554813 SLC30A2Q9BRI3 323 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 REPIN1Q9BWE0 567 aaKnown RBP11.22□□□□□ -0.61
APEX1-208ENST00000554813 OPA3Q9H6K4 179 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 NARFLQ9H6Q4 476 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 TMEM160Q9NX00 188 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 TREM2Q9NZC2 230 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 KCNS2Q9ULS6 477 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 PPP1R3CQ9UQK1 317 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 N6AMT1Q9Y5N5 214 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 CACNG2Q9Y698 323 aa11.22□□□□□ -0.61
APEX1-208ENST00000554813 SAC3D1A6NKF1 404 aa11.21□□□□□ -0.61
APEX1-208ENST00000554813 ZAR1LA6NP61 321 aa11.21□□□□□ -0.61
APEX1-208ENST00000554813 B4DSR2 109 aa11.21□□□□□ -0.61
APEX1-208ENST00000554813 XRCC2O43543 280 aa11.21□□□□□ -0.61
APEX1-208ENST00000554813 SELENOFO60613 162 aa11.21□□□□□ -0.61
APEX1-208ENST00000554813 ANXA2P07355 339 aaKnown RBP11.21□□□□□ -0.61
APEX1-208ENST00000554813 ANPEPP15144 967 aa11.21□□□□□ -0.61
APEX1-208ENST00000554813 IL2RGP31785 369 aa11.21□□□□□ -0.61
APEX1-208ENST00000554813 OPRL1P41146 370 aa11.21□□□□□ -0.61
APEX1-208ENST00000554813 NAA10P41227 235 aaPredicted RBP11.21□□□□□ -0.61
APEX1-208ENST00000554813 CX3CR1P49238 355 aa11.21□□□□□ -0.61
APEX1-208ENST00000554813 SRP9P49458 86 aaKnown RBP11.21□□□□□ -0.61
APEX1-208ENST00000554813 ZNF92Q03936 586 aa11.21□□□□□ -0.61
APEX1-208ENST00000554813 SNAI3Q3KNW1 292 aa11.21□□□□□ -0.61
APEX1-208ENST00000554813 CHRFAM7AQ494W8 412 aa11.21□□□□□ -0.61
APEX1-208ENST00000554813 AVPI1Q5T686 147 aa11.21□□□□□ -0.61
APEX1-208ENST00000554813 LCN1P1Q5VSP4 162 aa11.21□□□□□ -0.61
APEX1-208ENST00000554813 SLC16A9Q7RTY1 509 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms