RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 CMAHPQ9Y471 501 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 PCDHGB5Q9Y5G0 923 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 ATP23Q9Y6H3 246 aa6.96□□□□□ -1.3
LINC01397-201ENST00000554808 PDZD2O15018 2839 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 A0A0U1RQV5 110 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 TMEM269A0A1B0GVZ9 245 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 A0A1W2PQL4 384 aaPredicted RBP6.95□□□□□ -1.3
LINC01397-201ENST00000554808 TMEM129A0AVI4 362 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 METTL15A6NJ78 407 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 B9A039 149 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 LOC110117498-PIK3R3F6TDL0 507 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 MYL12BO14950 172 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 LCATP04180 440 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 LCKP06239 509 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 CDK1P06493 297 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 ANXA2P07355 339 aaKnown RBP6.95□□□□□ -1.3
LINC01397-201ENST00000554808 PSKH1P11801 424 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 ATP6V1B1P15313 513 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 CRHBPP24387 322 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 KLF3P57682 345 aaPredicted RBP6.95□□□□□ -1.3
LINC01397-201ENST00000554808 TAS2R43P59537 309 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 PPP1CBP62140 327 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 SLC35A2P78381 396 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 SMN1Q16637 294 aaKnown RBP6.95□□□□□ -1.3
LINC01397-201ENST00000554808 CCDC58Q4VC31 144 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 AGAP6Q5VW22 663 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 MBNL2Q5VZF2 373 aaKnown RBP6.95□□□□□ -1.3
LINC01397-201ENST00000554808 LRRN1Q6UXK5 716 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 FBXW12Q6X9E4 464 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 MYPOPQ86VE0 399 aaPredicted RBP6.95□□□□□ -1.3
LINC01397-201ENST00000554808 ZNF295-AS1Q8N0V1 137 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 ZNF786Q8N393 782 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 FTMTQ8N4E7 242 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 KLHL36Q8N4N3 616 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 YIPF7Q8N8F6 280 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 ABHD4Q8TB40 342 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 AKAP1Q92667 903 aaKnown RBP eCLIP6.95□□□□□ -1.3
LINC01397-201ENST00000554808 GGHQ92820 318 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 HS3ST6Q96QI5 342 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 TBX5Q99593 518 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 ALG8Q9BVK2 526 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 MND1Q9BWT6 205 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 OR10A2Q9H208 303 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 AMBNQ9NP70 447 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 CYSLTR2Q9NS75 346 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 FKBP14Q9NWM8 211 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 SLCO1C1Q9NYB5 712 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 AASSQ9UDR5 926 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 COPS3Q9UNS2 423 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 ERGIC3Q9Y282 383 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 MYRFQ9Y2G1 1151 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 LRRC42Q9Y546 428 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 SNX5Q9Y5X3 404 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 R4GMQ9 66 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 MED13LQ71F56 2210 aa6.95□□□□□ -1.3
LINC01397-201ENST00000554808 ARID1AO14497 2285 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 DHRS7CA6NNS2 312 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 RGS10O43665 173 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 XPNPEP2O43895 674 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 MTRF1O75570 445 aaKnown RBP6.94□□□□□ -1.3
LINC01397-201ENST00000554808 APOL3O95236 402 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 TNFAIP8O95379 198 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 IGHV3-13P01766 116 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 ERCC1P07992 297 aaPredicted RBP6.94□□□□□ -1.3
LINC01397-201ENST00000554808 HTR1AP08908 422 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 UBCP0CG48 685 aaKnown RBP6.94□□□□□ -1.3
LINC01397-201ENST00000554808 CCL2P13500 99 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 RAC2P15153 192 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 ZNF250P15622 560 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 ZNF12P17014 697 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 EEF1B2P24534 225 aaKnown RBP6.94□□□□□ -1.3
LINC01397-201ENST00000554808 TTKP33981 857 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 DDOSTP39656 456 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 WNT5AP41221 380 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 FABP6P51161 128 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 CCR9P51686 369 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 PRKXP51817 358 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 GBX2P52951 348 aaPredicted RBP6.94□□□□□ -1.3
LINC01397-201ENST00000554808 ZNF121P58317 390 aaPredicted RBP6.94□□□□□ -1.3
LINC01397-201ENST00000554808 SNRPD2P62316 118 aaKnown RBP6.94□□□□□ -1.3
LINC01397-201ENST00000554808 BDH1Q02338 343 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 ZNF85Q03923 595 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 HGFACQ04756 655 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 SPOCK1Q08629 439 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 DBPQ10586 325 aaPredicted RBP6.94□□□□□ -1.3
LINC01397-201ENST00000554808 EFNB3Q15768 340 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 TIGD6Q17RP2 521 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 FAM209AQ5JX71 171 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 ZNF684Q5T5D7 378 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 LIPNQ5VXI9 398 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 OTPQ5XKR4 325 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 FDX2Q6P4F2 183 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 PRSS48Q7RTY5 328 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 DTX2Q86UW9 622 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 ZNF101Q8IZC7 436 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 MUC15Q8N387 334 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 PAQR4Q8N4S7 273 aaPredicted RBP6.94□□□□□ -1.3
LINC01397-201ENST00000554808 SVOPQ8N4V2 548 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 SYNPRQ8TBG9 265 aa6.94□□□□□ -1.3
LINC01397-201ENST00000554808 TMEM171Q8WVE6 324 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms