RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 GCKP35557 465 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 SERPINB8P50452 374 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 RPL14P50914 215 aaKnown RBP3.43□□□□□ -1.86
SCFD1-211ENST00000554437 UGT2B15P54855 530 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 GNB2P62879 340 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 ZNF45Q02386 682 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 UNC119Q13432 240 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 SLC39A6Q13433 755 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 CAPRIN1Q14444 709 aaKnown RBP3.43□□□□□ -1.86
SCFD1-211ENST00000554437 LRRC36Q1X8D7 754 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 NSUN5P1Q3KNT7 163 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 CT45A1Q5HYN5 189 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 ACTL10Q5JWF8 245 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 RBM48Q5RL73 367 aaKnown RBP3.43□□□□□ -1.86
SCFD1-211ENST00000554437 MARCH8Q5T0T0 291 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 IDNKQ5T6J7 187 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 Q6ZN92 141 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 ACOT7LQ6ZUV0 252 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 ZNF589Q86UQ0 364 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-211ENST00000554437 PPP1R27Q86WC6 154 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 STX12Q86Y82 276 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 WDR31Q8NA23 367 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 ATP6V1C2Q8NEY4 427 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 OR51A7Q8NH64 312 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 CT45A3Q8NHU0 189 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 DNAJB3Q8WWF6 145 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 CPNE4Q96A23 557 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-211ENST00000554437 EEF1AKMT3Q96AZ1 226 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 RBBP8Q99708 897 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 RARRES2Q99969 163 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 RSG1Q9BU20 258 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 CALN1Q9BXU9 219 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 METTL8Q9H825 291 aaKnown RBP3.43□□□□□ -1.86
SCFD1-211ENST00000554437 TMBIM4Q9HC24 238 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 SDHAF2Q9NX18 166 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 RHBDL2Q9NX52 303 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 CYB5R1Q9UHQ9 305 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 MAP3K15Q6ZN16 1313 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 FRMPD3Q5JV73 1810 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 ZCCHC6Q5VYS8 1495 aaKnown RBP3.42□□□□□ -1.86
SCFD1-211ENST00000554437 ARHGAP23Q9P227 1491 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 CENPBD1B2RD01 187 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 GOLGA6L19H0YKK7 550 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 SMKR1H3BMG3 65 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 H7C2Y5 167 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 ENSAO43768 121 aaKnown RBP3.42□□□□□ -1.86
SCFD1-211ENST00000554437 EIF3GO75821 320 aaKnown RBP eCLIP3.42□□□□□ -1.86
SCFD1-211ENST00000554437 PSMG1O95456 288 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 OXTP01178 125 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 GCGP01275 180 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 OCM2P0CE71 109 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 FUT3P21217 361 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 RBMXP38159 391 aaKnown RBP3.42□□□□□ -1.86
SCFD1-211ENST00000554437 RGS6P49758 472 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 CEBPGP53567 150 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 DSTNP60981 165 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 RPL31P62899 125 aaKnown RBP3.42□□□□□ -1.86
SCFD1-211ENST00000554437 PAFAH1B2P68402 229 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 CKAP4Q07065 602 aaKnown RBP3.42□□□□□ -1.86
SCFD1-211ENST00000554437 HERPUD1Q15011 391 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 ZBED5Q49AG3 693 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 CPTPQ5TA50 214 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 RWDD4Q6NW29 188 aaKnown RBP3.42□□□□□ -1.86
SCFD1-211ENST00000554437 DNM1P46Q6ZS02 220 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 Q6ZVH6 145 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 TMEM150AQ86TG1 271 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 TMEM25Q86YD3 366 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 MDS2Q8NDY4 140 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 CCDC112Q8NEF3 446 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 OR6X1Q8NH79 312 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 OR5AK3PQ8NH89 298 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 ESR2Q92731 530 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 RORBQ92753 470 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 SMIM14Q96QK8 99 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 PLEKHF1Q96S99 279 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 ING2Q9H160 280 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 KCNIP1Q9NZI2 227 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 PRG3Q9Y2Y8 225 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-211ENST00000554437 FANCIQ9NVI1 1328 aa3.42□□□□□ -1.86
SCFD1-211ENST00000554437 IGHV7-81A0A0B4J1V7 117 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 ZNF816-ZNF321PA0A0X1KG74 233 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 FAM166BA8MTA8 275 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 GATCO43716 136 aaKnown RBP3.41□□□□□ -1.86
SCFD1-211ENST00000554437 ICOSLGO75144 302 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 MMP23AO75900 390 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 ARG1P05089 322 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 IGLL1P15814 213 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 RAB4AP20338 218 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 GABRR1P24046 479 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 PSMB5P28074 263 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 NTSP30990 170 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 MAGEA3P43357 314 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 CSNK1DP48730 415 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 TGM4P49221 684 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 SUB1P53999 127 aaKnown RBP eCLIP3.41□□□□□ -1.861e-7■■■■□ 20.1
SCFD1-211ENST00000554437 RPL10AP62906 217 aaKnown RBP3.41□□□□□ -1.86
SCFD1-211ENST00000554437 SLC25A11Q02978 314 aaKnown RBP3.41□□□□□ -1.86
SCFD1-211ENST00000554437 BNIP2Q12982 314 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 PSG7Q13046 419 aa3.41□□□□□ -1.86
SCFD1-211ENST00000554437 TFDP2Q14188 446 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms