RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 CFL2Q9Y281 166 aa4.8□□□□□ -1.64
ATXN3-226ENST00000554350 IFT52Q9Y366 437 aa4.8□□□□□ -1.64
ATXN3-226ENST00000554350 PEX16Q9Y5Y5 336 aa4.8□□□□□ -1.64
ATXN3-226ENST00000554350 A0A087WV62 115 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 TRBV4-1A0A0J9YWV2 114 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 FUOMA2VDF0 154 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 AGAP5A6NIR3 686 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 GLOD5A6NK44 160 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 ZNF814B7Z6K7 855 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 LOC110117498-PIK3R3F6TDL0 507 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 CLDN34H7C241 214 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 J3KTA2 159 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 K7EIL1 84 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 F2RL2O00254 374 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 RTCAO00442 366 aaKnown RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 OR10H3O60404 316 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 FMO6PO60774 539 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 SH3BGRLO75368 114 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 UGT2B17O75795 530 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 OR5F1O95221 314 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 LCKP06239 509 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 OR4A8P0C604 315 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 OR12D1P0DN82 309 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 NR2F6P10588 404 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 PORP16435 677 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 NAGAP17050 411 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 IGHV1-2P23083 117 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 IL12BP29460 328 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 C21orf33P30042 268 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 TLX1P31314 330 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 SOX6P35712 828 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 FEN1P39748 380 aaKnown RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 SLC1A3P43003 542 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 CAPZA2P47755 286 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 MTNR1AP48039 350 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 GSSP48637 474 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 BCAP31P51572 246 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 XKP51811 444 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 NCBP2P52298 156 aaKnown RBP eCLIP4.79□□□□□ -1.645e-7■■■■□ 25.1
ATXN3-226ENST00000554350 VBP1P61758 197 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 IGLV3-21P80748 117 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 ACSM1Q08AH1 577 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 ST3GAL3Q11203 375 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 RAB40BQ12829 278 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 HSPB3Q12988 150 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 TSPAN31Q12999 210 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 MLLT11Q13015 90 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 BIKQ13323 160 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 TMED1Q13445 227 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 C1DQ13901 141 aaKnown RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 GANABQ14697 944 aaKnown RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 TRAM2Q15035 370 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 DECR1Q16698 335 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 TRIM16LQ309B1 348 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 ANKDD1AQ495B1 522 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 PDSS1Q5T2R2 415 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 ATAD3BQ5T9A4 648 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 CDC73Q6P1J9 531 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 TNFAIP8L2Q6P589 184 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 FIP1L1Q6UN15 594 aaKnown RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 RASSF6Q6ZTQ3 369 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 RNF113BQ8IZP6 322 aaKnown RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 NANOGP1Q8N7R0 232 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 OR9Q2Q8NGE9 314 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 OR9Q1Q8NGQ5 310 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 OR52J3Q8NH60 311 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 OR2V1Q8NHB1 315 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 MCFD2Q8NI22 146 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 SLC7A13Q8TCU3 470 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 XAGE5Q8WWM1 108 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 OIT3Q8WWZ8 545 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 PIK3R3Q92569 461 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 SLC35B4Q969S0 331 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 EXOSC8Q96B26 276 aaKnown RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 PHF21AQ96BD5 680 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 ELP4Q96EB1 424 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 CNRIP1Q96F85 164 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 ZNF48Q96MX3 618 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 WDFY2Q96P53 400 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 MGLLQ99685 303 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 MND1Q9BWT6 205 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 SORBS1Q9BX66 1292 aaKnown RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 TEX12Q9BXU0 123 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 ACTRT3Q9BYD9 372 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 TMEM185BQ9H7F4 350 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 ZNF665Q9H7R5 613 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 PTGES2Q9H7Z7 377 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 FGF20Q9NP95 211 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 KRCC1Q9NPI7 259 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 SERTAD4Q9NUC0 356 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 KLHL13Q9P2N7 655 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 CRNNQ9UBG3 495 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 ICAM5Q9UMF0 924 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 TRAPPC4Q9Y296 219 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 LSM2Q9Y333 95 aaKnown RBP4.79□□□□□ -1.64
ATXN3-226ENST00000554350 SLC25A15Q9Y619 301 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 ZNF780BQ9Y6R6 833 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 U3KQK5 164 aa4.79□□□□□ -1.64
ATXN3-226ENST00000554350 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.78□□□□□ -1.64
ATXN3-226ENST00000554350 TMEM129A0AVI4 362 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms