RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 OR8B3Q8NGG8 313 aa15.71■□□□□ 0.11
CPSF2-203ENST00000554290 OR11L1Q8NGX0 322 aa15.71■□□□□ 0.11
CPSF2-203ENST00000554290 GNPDA2Q8TDQ7 276 aa15.71■□□□□ 0.11
CPSF2-203ENST00000554290 RAB40AQ8WXH6 277 aa15.71■□□□□ 0.11
CPSF2-203ENST00000554290 ERGIC1Q969X5 290 aa15.71■□□□□ 0.11
CPSF2-203ENST00000554290 SLC25A28Q96A46 364 aa15.71■□□□□ 0.11
CPSF2-203ENST00000554290 OR8B2Q96RD0 313 aa15.71■□□□□ 0.11
CPSF2-203ENST00000554290 CYB5R1Q9UHQ9 305 aa15.71■□□□□ 0.11
CPSF2-203ENST00000554290 KCNG2Q9UJ96 466 aa15.71■□□□□ 0.11
CPSF2-203ENST00000554290 IGHV2-70DA0A0C4DH43 119 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 OR6C68A6NDL8 312 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 HLA-DPB1P04440 258 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 HSD17B1P14061 328 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 GATA4P43694 442 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 GSSP48637 474 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 PAX2Q02962 417 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 TRAP1Q12931 704 aaKnown RBP15.7■□□□□ 0.1
CPSF2-203ENST00000554290 ZNF404Q494X3 552 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 SAMD4BQ5PRF9 694 aaKnown RBP15.7■□□□□ 0.1
CPSF2-203ENST00000554290 SHISA2Q6UWI4 295 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 PGAP1Q75T13 922 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 PARP8Q8N3A8 854 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 SDR9C7Q8NEX9 313 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 NSMCE2Q96MF7 247 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 DUX5Q96PT3 197 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 ZNF747Q9BV97 191 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 FAM107BQ9H098 131 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 NOP16Q9Y3C1 178 aaKnown RBP15.7■□□□□ 0.1
CPSF2-203ENST00000554290 PCDHGB1Q9Y5G3 927 aa15.7■□□□□ 0.1
CPSF2-203ENST00000554290 ZNF823P16415 610 aa15.69■□□□□ 0.1
CPSF2-203ENST00000554290 RRM2P31350 389 aa15.69■□□□□ 0.1
CPSF2-203ENST00000554290 GGT2P36268 569 aa15.69■□□□□ 0.1
CPSF2-203ENST00000554290 PITPNBP48739 271 aa15.69■□□□□ 0.1
CPSF2-203ENST00000554290 TSPAN31Q12999 210 aa15.69■□□□□ 0.1
CPSF2-203ENST00000554290 MRPL21Q7Z2W9 205 aaKnown RBP15.69■□□□□ 0.1
CPSF2-203ENST00000554290 NAA40Q86UY6 237 aa15.69■□□□□ 0.1
CPSF2-203ENST00000554290 SPRYD4Q8WW59 207 aaPredicted RBP15.69■□□□□ 0.1
CPSF2-203ENST00000554290 SPTSSAQ969W0 71 aa15.69■□□□□ 0.1
CPSF2-203ENST00000554290 SLCO4A1Q96BD0 722 aa15.69■□□□□ 0.1
CPSF2-203ENST00000554290 UPRTQ96BW1 309 aa15.69■□□□□ 0.1
CPSF2-203ENST00000554290 SLC22A4Q9H015 551 aa15.69■□□□□ 0.1
CPSF2-203ENST00000554290 NSRP1Q9H0G5 558 aaKnown RBP15.69■□□□□ 0.1
CPSF2-203ENST00000554290 IL1RAPQ9NPH3 570 aa15.69■□□□□ 0.1
CPSF2-203ENST00000554290 CLN8Q9UBY8 286 aa15.69■□□□□ 0.1
CPSF2-203ENST00000554290 KIR2DS1A0A191URI9 304 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 RNASE1P07998 156 aaKnown RBP15.68■□□□□ 0.1
CPSF2-203ENST00000554290 PMELP40967 661 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 CD200P41217 278 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 RAD23AP54725 363 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.68■□□□□ 0.1
CPSF2-203ENST00000554290 DBPQ10586 325 aaPredicted RBP15.68■□□□□ 0.1
CPSF2-203ENST00000554290 MAB21L1Q13394 359 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 SLC35F1Q5T1Q4 408 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 RPL13AP3Q6NVV1 102 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 ZNF620Q6ZNG0 422 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 DCDC5Q6ZRR9 648 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 C9orf139Q6ZV77 190 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 PGAM4Q8N0Y7 254 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 OR52L1Q8NGH7 329 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 Q8TCH9 128 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 ZNF48Q96MX3 618 aaPredicted RBP15.68■□□□□ 0.1
CPSF2-203ENST00000554290 CDRT15Q96T59 188 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 FN3KQ9H479 309 aa15.68■□□□□ 0.1
CPSF2-203ENST00000554290 PNRC2Q9NPJ4 139 aaKnown RBP15.68■□□□□ 0.1
CPSF2-203ENST00000554290 CLDN34H7C241 214 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 M0R135 149 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 PHYHO14832 338 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 ARPC2O15144 300 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 SNX3O60493 162 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 KRT36O76013 467 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 IGHV4-38-2P0DP08 117 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 MSX2P35548 267 aaPredicted RBP15.67■□□□□ 0.1
CPSF2-203ENST00000554290 PRSS12P56730 875 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 OR8G1Q15617 311 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 FAM201AQ5SY85 155 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 CPLX4Q7Z7G2 160 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 ZDHHC21Q8IVQ6 265 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 LINC00471Q8N535 108 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 PROKR2Q8NFJ6 384 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 OR2T4Q8NH00 348 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 ZNF799Q96GE5 643 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 C1orf147Q96MC9 270 aaPredicted RBP15.67■□□□□ 0.1
CPSF2-203ENST00000554290 NUDT16L1Q9BRJ7 211 aaKnown RBP15.67■□□□□ 0.1
CPSF2-203ENST00000554290 FN3KRPQ9HA64 309 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 MRPL22Q9NWU5 206 aaKnown RBP15.67■□□□□ 0.1
CPSF2-203ENST00000554290 CD300AQ9UGN4 299 aa15.67■□□□□ 0.1
CPSF2-203ENST00000554290 IGHV3OR16-10A0A075B7F0 116 aa15.66■□□□□ 0.1
CPSF2-203ENST00000554290 GMDSO60547 372 aa15.66■□□□□ 0.1
CPSF2-203ENST00000554290 FAM20BO75063 409 aa15.66■□□□□ 0.1
CPSF2-203ENST00000554290 PLATP00750 562 aa15.66■□□□□ 0.1
CPSF2-203ENST00000554290 CA6P23280 308 aa15.66■□□□□ 0.1
CPSF2-203ENST00000554290 KCNJ8Q15842 424 aa15.66■□□□□ 0.1
CPSF2-203ENST00000554290 CLEC12AQ5QGZ9 265 aa15.66■□□□□ 0.1
CPSF2-203ENST00000554290 PGBD2Q6P3X8 592 aa15.66■□□□□ 0.1
CPSF2-203ENST00000554290 DACT3Q96B18 629 aaPredicted RBP15.66■□□□□ 0.1
CPSF2-203ENST00000554290 MAP6Q96JE9 813 aa15.66■□□□□ 0.1
CPSF2-203ENST00000554290 UFSP2Q9NUQ7 469 aa15.66■□□□□ 0.1
CPSF2-203ENST00000554290 NDE1Q9NXR1 346 aa15.66■□□□□ 0.1
CPSF2-203ENST00000554290 RNF7Q9UBF6 113 aa15.66■□□□□ 0.1
CPSF2-203ENST00000554290 CDH10Q9Y6N8 788 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms