RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 MRPL49Q13405 166 aaKnown RBP4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ALKBH1Q13686 389 aaKnown RBP4.38□□□□□ -1.71
VTI1B-202ENST00000553619 TSTQ16762 297 aaKnown RBP4.38□□□□□ -1.71
VTI1B-202ENST00000553619 MEP1BQ16820 701 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF829Q3KNS6 432 aaPredicted RBP4.38□□□□□ -1.71
VTI1B-202ENST00000553619 TP53I3Q53FA7 332 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ELFN2Q5R3F8 820 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 PHYHD1Q5SRE7 291 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 HIST2H3PS2Q5TEC6 136 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 OR2G6Q5TZ20 316 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 XAF1Q6GPH4 301 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 RTL6Q6ICC9 239 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 C16orf87Q6PH81 154 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ARL9Q6T311 187 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 UNQ6126/PRO20091Q6UXV3 157 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 TFAP2EQ6VUC0 442 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF704Q6ZNC4 412 aaPredicted RBP4.38□□□□□ -1.71
VTI1B-202ENST00000553619 HIST2H3AQ71DI3 136 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.38□□□□□ -1.71
VTI1B-202ENST00000553619 MRGPRGQ86SM5 289 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 P2RY8Q86VZ1 359 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 KLBQ86Z14 1044 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 LRRC18Q8N456 261 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 C17orf78Q8N4C9 275 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF610Q8N9Z0 462 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 CCDC54Q8NEL0 328 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 C1orf162Q8NEQ5 155 aaPredicted RBP4.38□□□□□ -1.71
VTI1B-202ENST00000553619 OR1J2Q8NGS2 313 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 OR13F1Q8NGS4 319 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 OR14K1Q8NGZ2 314 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 OR52N5Q8NH56 324 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 RAB2BQ8WUD1 216 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 RNF133Q8WVZ7 376 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ASB5Q8WWX0 329 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 SGCDQ92629 289 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 SPTSSAQ969W0 71 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 PPP1R14BQ96C90 147 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 STARD4Q96DR4 205 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 MUCL1Q96DR8 90 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 SLAMF6Q96DU3 332 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 C4orf36Q96KX1 117 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 OR5M11Q96RB7 305 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 OR8B4Q96RC9 309 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 DCLRE1CQ96SD1 692 aaKnown RBP4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF649Q9BS31 505 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 RHNO1Q9BSD3 238 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF416Q9BWM5 594 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 HDHD2Q9H0R4 259 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 OR10A4Q9H209 315 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ELOVL3Q9HB03 270 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 OBP2BQ9NPH6 170 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 TMEM38BQ9NVV0 291 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 AURKAIP1Q9NWT8 199 aaPredicted RBP4.38□□□□□ -1.71
VTI1B-202ENST00000553619 PLEK2Q9NYT0 353 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 COQ3Q9NZJ6 369 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 MALT1Q9UDY8 824 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 CLEC2DQ9UHP7 191 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 ATPIF1Q9UII2 106 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 GNG8Q9UK08 70 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 COPS3Q9UNS2 423 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 CACNA1CQ13936 2221 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 CACNA1GO43497 2377 aa4.38□□□□□ -1.71
VTI1B-202ENST00000553619 WDFY4Q6ZS81 3184 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 FREM1Q5H8C1 2179 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 TMEM269A0A1B0GVZ9 245 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 OR6C6A6NF89 314 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 TMEM212A6NML5 194 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 H3BSA7 217 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 CCL21O00585 134 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 AIREO43918 545 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 GATBO75879 557 aaKnown RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 RPP14O95059 124 aaKnown RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 MPZL1O95297 269 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 GPANK1O95872 356 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 CGAP01215 116 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 IGHV3-9P01782 118 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 CD79AP11912 226 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 B4GALT1P15291 398 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 PPP3CBP16298 524 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 TUBG1P23258 451 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 IL32P24001 234 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 MAPK3P27361 379 aaPredicted RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 GABRA5P31644 462 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 APLNRP35414 380 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 CA7P43166 264 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 RAB1AP62820 205 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 TUBA1BP68363 451 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 FOXE3Q13461 319 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 ENDOGQ14249 297 aaKnown RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 RAB35Q15286 201 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 GUSBP1Q15486 140 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 CCDC92Q53HC0 331 aaPredicted RBP4.37□□□□□ -1.71
VTI1B-202ENST00000553619 TMEM177Q53S58 311 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 ZNF684Q5T5D7 378 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 TMEM244Q5VVB8 128 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 GPR107Q5VW38 600 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 LIPNQ5VXI9 398 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 IGFL4Q6B9Z1 124 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 VWA1Q6PCB0 445 aa4.37□□□□□ -1.71
VTI1B-202ENST00000553619 TUBA1AQ71U36 451 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms