RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 PNLIPRP2P54317 469 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 IL34Q6ZMJ4 242 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 ZSCAN4Q8NAM6 433 aaPredicted RBP15.65■□□□□ 0.1
SYNE3-202ENST00000553340 OR4A4PQ8NGN8 299 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 OR4K15Q8NH41 348 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 ZNF721Q8TF20 911 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 OR11A1Q9GZK7 315 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 UQCC1Q9NVA1 299 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 SOHLH2Q9NX45 425 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 CPAMD8Q8IZJ3 1885 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 SPTY2D1-AS1A0A0U1RR47 76 aa15.64■□□□□ 0.1
SYNE3-202ENST00000553340 OR2T1O43869 369 aa15.64■□□□□ 0.1
SYNE3-202ENST00000553340 CBX5P45973 191 aa15.64■□□□□ 0.1
SYNE3-202ENST00000553340 MMP16P51512 607 aa15.64■□□□□ 0.1
SYNE3-202ENST00000553340 ZNF528Q3MIS6 628 aa15.64■□□□□ 0.1
SYNE3-202ENST00000553340 TMEM128Q5BJH2 165 aa15.64■□□□□ 0.1
SYNE3-202ENST00000553340 GRINAQ7Z429 371 aa15.64■□□□□ 0.1
SYNE3-202ENST00000553340 KDM8Q8N371 416 aa15.64■□□□□ 0.1
SYNE3-202ENST00000553340 OR1M1Q8NGA1 313 aa15.64■□□□□ 0.1
SYNE3-202ENST00000553340 OR10R2Q8NGX6 335 aa15.64■□□□□ 0.1
SYNE3-202ENST00000553340 TSLPQ969D9 159 aa15.64■□□□□ 0.1
SYNE3-202ENST00000553340 RRNAD1Q96FB5 475 aaKnown RBP15.64■□□□□ 0.1
SYNE3-202ENST00000553340 NUDT16L1Q9BRJ7 211 aaKnown RBP15.64■□□□□ 0.1
SYNE3-202ENST00000553340 ZFP57Q9NU63 452 aa15.64■□□□□ 0.1
SYNE3-202ENST00000553340 MMACHCQ9Y4U1 282 aa15.64■□□□□ 0.1
SYNE3-202ENST00000553340 UNC80Q8N2C7 3258 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 A6NIZ1 184 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 TSPAN2O60636 221 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 DDAH2O95865 285 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 HLA-DOBP13765 273 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 GABRA4P48169 554 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 PPM1FP49593 454 aaPredicted RBP15.64■□□□□ 0.09
SYNE3-202ENST00000553340 RAP1BP61224 184 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 RAP1AP62834 184 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 PLCXD2Q0VAA5 305 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 PJVKQ0ZLH3 352 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 FZD2Q14332 565 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 SGCAQ16586 387 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 PCK2Q16822 640 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 DRAM2Q6UX65 266 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 TMEM92Q6UXU6 159 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 TERB2Q8NHR7 220 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 IFT22Q9H7X7 185 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 TDRD6O60522 2096 aaKnown RBP15.64■□□□□ 0.09
SYNE3-202ENST00000553340 ZNF705EA8MWA4 302 aaPredicted RBP15.64■□□□□ 0.09
SYNE3-202ENST00000553340 SSX5O60225 188 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 F12P00748 615 aaPredicted RBP15.64■□□□□ 0.09
SYNE3-202ENST00000553340 FAM157CP0CG43 387 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 CAPZBP47756 277 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 FMODQ06828 376 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 EBPQ15125 230 aaKnown RBP15.64■□□□□ 0.09
SYNE3-202ENST00000553340 TMEM231Q9H6L2 316 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 ESRP2Q9H6T0 727 aaKnown RBP15.64■□□□□ 0.09
SYNE3-202ENST00000553340 PTGES2Q9H7Z7 377 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 SLC5A6Q9Y289 635 aa15.64■□□□□ 0.09
SYNE3-202ENST00000553340 H0YIZ8 118 aa15.63■□□□□ 0.09
SYNE3-202ENST00000553340 SYT7O43581 403 aa15.63■□□□□ 0.09
SYNE3-202ENST00000553340 THEGLP0DJG4 465 aa15.63■□□□□ 0.09
SYNE3-202ENST00000553340 NPBWR1P48145 328 aa15.63■□□□□ 0.09
SYNE3-202ENST00000553340 AWAT2Q6E213 333 aa15.63■□□□□ 0.09
SYNE3-202ENST00000553340 TMPPEQ6ZT21 453 aa15.63■□□□□ 0.09
SYNE3-202ENST00000553340 KNL1Q8NG31 2342 aa15.63■□□□□ 0.09
SYNE3-202ENST00000553340 PQLC2LA1A4F0 135 aa15.63■□□□□ 0.09
SYNE3-202ENST00000553340 ZNF585AQ6P3V2 769 aa15.63■□□□□ 0.09
SYNE3-202ENST00000553340 OR5D14Q8NGL3 314 aa15.63■□□□□ 0.09
SYNE3-202ENST00000553340 GPR119Q8TDV5 335 aa15.63■□□□□ 0.09
SYNE3-202ENST00000553340 RNF133Q8WVZ7 376 aa15.63■□□□□ 0.09
SYNE3-202ENST00000553340 ADAT3Q96EY9 351 aaPredicted RBP15.63■□□□□ 0.09
SYNE3-202ENST00000553340 COA4Q9NYJ1 87 aa15.63■□□□□ 0.09
SYNE3-202ENST00000553340 LPAR3Q9UBY5 353 aa15.63■□□□□ 0.09
SYNE3-202ENST00000553340 TCRBV21S2A2A0A5A6 115 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 NPIPA5E9PKD4 350 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 TTRP02766 147 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 IGHV4-34P06331 123 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 ABOP16442 354 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 EMP2P54851 167 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 TDGQ13569 410 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 KLHL24Q6TFL4 600 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 C5orf46Q6UWT4 87 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 ANGPTL5Q86XS5 388 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 C9orf40Q8IXQ3 194 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 GLYATL2Q8WU03 294 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 RAB18Q9NP72 206 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 FAM206AQ9NX38 181 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 FBLN5Q9UBX5 448 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 NPIPA1Q9UND3 350 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 CHRM2P08172 466 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 ELAVL1Q15717 326 aaKnown RBP15.62■□□□□ 0.09
SYNE3-202ENST00000553340 AVPI1Q5T686 147 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 PRSS54Q6PEW0 395 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 COX15Q7KZN9 410 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 ZNF101Q8IZC7 436 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 OR13C9Q8NGT0 318 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 ASB10Q8WXI3 467 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 CTSFQ9UBX1 484 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 ATG2AQ2TAZ0 1938 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 PCNX3Q9H6A9 2034 aa15.62■□□□□ 0.09
SYNE3-202ENST00000553340 TMEM14DPA8MWL7 114 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 SFT2D2O95562 160 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 HEXAP06865 529 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms