RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 C12orf71A8MTZ7 269 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 IFNGP01579 166 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 IGHV2-70P01814 119 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 PRTN3P24158 256 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 CENPAP49450 140 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 CDK5R2Q13319 367 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 SPRNQ5BIV9 151 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 ZMAT1Q5H9K5 638 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 SLC27A4Q6P1M0 643 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 FAHD1Q6P587 224 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 RBMS3Q6XE24 437 aaKnown RBP9.99□□□□□ -0.81
CKAP4-202ENST00000552828 RFPL4BQ6ZWI9 263 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 OR6V1Q8N148 313 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 SIGLECL1Q8N7X8 197 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 NPEPL1Q8NDH3 523 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 SDR9C7Q8NEX9 313 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 OR4Q3Q8NH05 313 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 AKR7LQ8NHP1 331 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 ST7LQ8TDW4 575 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 TSSK2Q96PF2 358 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 WACQ9BTA9 647 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 TEX12Q9BXU0 123 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 OR2H1Q9GZK4 316 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 WNT5BQ9H1J7 359 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 SEMA6AQ9H2E6 1030 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 RPRD1BQ9NQG5 326 aaKnown RBP9.99□□□□□ -0.81
CKAP4-202ENST00000552828 MMP26Q9NRE1 261 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 PAPOLBQ9NRJ5 636 aaKnown RBP9.99□□□□□ -0.81
CKAP4-202ENST00000552828 PLEK2Q9NYT0 353 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 PURGQ9UJV8 347 aaKnown RBP9.99□□□□□ -0.81
CKAP4-202ENST00000552828 NUP50Q9UKX7 468 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 PPIAL4AQ9Y536 164 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 TIMM10BQ9Y5J6 103 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 NPTNQ9Y639 398 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 VWFP04275 2813 aa9.99□□□□□ -0.81
CKAP4-202ENST00000552828 ISPDA4D126 451 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 RIIAD1A6NNX1 92 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 TRAPPC2LH3BP13 241 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 CLDN34H7C241 214 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 NGFP01138 241 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 HMGN1P05114 100 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 ZNF12P17014 697 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 TUBG1P23258 451 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 GRK5P34947 590 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 SLC6A9P48067 706 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 DAPP51397 102 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 PPP1CBP62140 327 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 LSM6P62312 80 aaKnown RBP9.98□□□□□ -0.81
CKAP4-202ENST00000552828 ZNF154Q13106 437 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 GINS1Q14691 196 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 TMEM155Q4W5P6 130 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 KLF17Q5JT82 389 aaPredicted RBP9.98□□□□□ -0.81
CKAP4-202ENST00000552828 ZNF362Q5T0B9 420 aaPredicted RBP9.98□□□□□ -0.81
CKAP4-202ENST00000552828 SYT9Q86SS6 491 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 ZBTB46Q86UZ6 589 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 LRRC28Q86X40 367 aaPredicted RBP9.98□□□□□ -0.81
CKAP4-202ENST00000552828 ALDH16A1Q8IZ83 802 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 ZNF283Q8N7M2 679 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 CYB561A3Q8NBI2 242 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 OR2T4Q8NH00 348 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 ABHD4Q8TB40 342 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 C1orf147Q96MC9 270 aaPredicted RBP9.98□□□□□ -0.81
CKAP4-202ENST00000552828 DDOQ99489 341 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 EMC7Q9NPA0 242 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 TUBG2Q9NRH3 451 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 UBAP1Q9NZ09 502 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 ZNF69Q9UC07 566 aa9.98□□□□□ -0.81
CKAP4-202ENST00000552828 IGLV1-36A0A0B4J1U3 117 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 DNAJC9-AS1A6NH13 148 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 A8MXK9 166 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 H3BNX3 289 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 DCTN6O00399 190 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 SCG5P05408 212 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 RNASE1P07998 156 aaKnown RBP9.97□□□□□ -0.81
CKAP4-202ENST00000552828 ZNF3P17036 446 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 SCRN3Q0VDG4 424 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 PSG7Q13046 419 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 ENDOGQ14249 297 aaKnown RBP9.97□□□□□ -0.81
CKAP4-202ENST00000552828 KCNMB1Q16558 191 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 PARP8Q8N3A8 854 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 SPICQ8N5J4 248 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 IQCF1Q8N6M8 205 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 SLC37A3Q8NCC5 494 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 PROKR2Q8NFJ6 384 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 C4orf45Q96LM5 186 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 PKP2Q99959 881 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 OSBPL10Q9BXB5 764 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 GABARAPL1Q9H0R8 117 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 FN3KQ9H479 309 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 ELOVL3Q9HB03 270 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 PATZ1Q9HBE1 687 aaKnown RBP9.97□□□□□ -0.81
CKAP4-202ENST00000552828 MSL2Q9HCI7 577 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 S100A14Q9HCY8 104 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 CMC2Q9NRP2 79 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 KRT84Q9NSB2 600 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 TMEM106BQ9NUM4 274 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 DCAF16Q9NXF7 216 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 NKX1-2Q9UD57 310 aaPredicted RBP9.97□□□□□ -0.81
CKAP4-202ENST00000552828 ENOPH1Q9UHY7 261 aa9.97□□□□□ -0.81
CKAP4-202ENST00000552828 OAZ3Q9UMX2 235 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms