RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 MAN2C1Q9NTJ4 1040 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 EXD2Q9NVH0 621 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 CTSZQ9UBR2 303 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 SNX6Q9UNH7 406 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 TMED7Q9Y3B3 224 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 ANGPTL3Q9Y5C1 460 aa1.78□□□□□ -2.12
PTCH1-223ENST00000551623 MUC4Q99102 2169 aa1.78□□□□□ -2.13
PTCH1-223ENST00000551623 HERC1Q15751 4861 aa1.78□□□□□ -2.13
PTCH1-223ENST00000551623 TMEM72A0PK05 275 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 NPIPB13A6NJU9 1138 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 LRRC30A6NM36 301 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 NPIPB5A8MRT5 1133 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 A8MVM7 634 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 SUPT3HB4E1H0 165 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 NPIPB4C9JG80 1138 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 M0R1W7 72 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 MANBAO00462 879 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 SLC25A17O43808 307 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 BCAS1O75363 584 aaPredicted RBP1.77□□□□□ -2.13
PTCH1-223ENST00000551623 SUPT3HO75486 399 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 STX11O75558 287 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 PAHP00439 452 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 KRT6AP02538 564 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 KRT6BP04259 564 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 LCKP06239 509 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 TPM3P06753 285 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 TFPTP0C1Z6 253 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 UBTFL6P0CB48 400 aaPredicted RBP1.77□□□□□ -2.13
PTCH1-223ENST00000551623 CFC1BP0CG36 223 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 CFC1P0CG37 223 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 PNMTP11086 282 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 CD79AP11912 226 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 B4GALT1P15291 398 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF43P17038 809 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 RPS4Y1P22090 263 aaKnown RBP1.77□□□□□ -2.13
PTCH1-223ENST00000551623 AHCYP23526 432 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 PRPH2P23942 346 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 EEF1B2P24534 225 aaKnown RBP1.77□□□□□ -2.13
PTCH1-223ENST00000551623 CNTFRP26992 372 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 CRABP2P29373 138 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 MYCNOSP40205 109 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 CRATP43155 626 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 KCNJ1P48048 391 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 KRT6CP48668 564 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 AMTP48728 403 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 CCR4P51679 360 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF133P52736 654 aaPredicted RBP1.77□□□□□ -2.13
PTCH1-223ENST00000551623 RAD23AP54725 363 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 CLDN17P56750 224 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 GUCY2DQ02846 1103 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 ARL16Q0P5N6 197 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 HSPB3Q12988 150 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 PSG7Q13046 419 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 CEACAM7Q14002 265 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 KIAA0040Q15053 153 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 RASA2Q15283 850 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 SPA17Q15506 151 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 MAPK14Q16539 360 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 HIST3H3Q16695 136 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 PFKFB4Q16877 469 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 XKR7Q5GH72 579 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 CLEC12AQ5QGZ9 265 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 PHYHD1Q5SRE7 291 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 FAM69AQ5T7M9 428 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 C9orf66Q5T8R8 295 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 SEL1L2Q5TEA6 688 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 NCR3LG1Q68D85 454 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 LGALS9CQ6DKI2 356 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 HCP5Q6MZN7 132 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 TTC27Q6P3X3 843 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 C5orf46Q6UWT4 87 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 LYPD2Q6UXB3 125 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 RNF165Q6ZSG1 346 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 RFPL4BQ6ZWI9 263 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 GSTA5Q7RTV2 222 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 VMO1Q7Z5L0 202 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 GPAT4Q86UL3 456 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 VRK2Q86Y07 508 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 ZDHHC23Q8IYP9 409 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 C1orf87Q8N0U7 546 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 SLC22A24Q8N4F4 322 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 TMCO5AQ8N6Q1 288 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF114Q8NC26 417 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 NPEPL1Q8NDH3 523 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 OR4X2Q8NGF9 303 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 OR52H1Q8NGJ2 320 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 OR1J1Q8NGS3 322 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 SFXN5Q8TD22 340 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 C2CD4CQ8TF44 421 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 ITLN1Q8WWA0 313 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 SELENOMQ8WWX9 145 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 SLC35B4Q969S0 331 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 MOAP1Q96BY2 351 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 OR2V2Q96R30 315 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 EPYCQ99645 322 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 PITX2Q99697 317 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 CPNE1Q99829 537 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 CCT7Q99832 543 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 SSX3Q99909 188 aa1.77□□□□□ -2.13
PTCH1-223ENST00000551623 DCTN5Q9BTE1 182 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms