RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PDIK1LQ8N165 341 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF619Q8N2I2 560 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 MUC15Q8N387 334 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 OTUD6BQ8N6M0 293 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 LRRC17Q8N6Y2 441 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 SNX31Q8N9S9 440 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 SYT14Q8NB59 555 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 SPATA4Q8NEY3 305 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 NUP37Q8NFH4 326 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 OR5AP2Q8NGF4 316 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 OR5T2Q8NGG2 359 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 OR52E4Q8NGH9 312 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 OR4D10Q8NGI6 311 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 OR6S1Q8NH40 331 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 SGMS2Q8NHU3 365 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 FAM76AQ8TAV0 307 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 MAGEE2Q8TD90 523 aaPredicted RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 MRGPRDQ8TDS7 321 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 C10orf82Q8WW14 230 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 YIPF5Q969M3 257 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 CPNE4Q96A23 557 aaPredicted RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 CIDECQ96AQ7 238 aaPredicted RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 TMEM45BQ96B21 275 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 FAM111AQ96PZ2 611 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 TMEM237Q96Q45 408 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 KCNA7Q96RP8 456 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 SDF2Q99470 211 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 ERP44Q9BS26 406 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 SPXQ9BT56 116 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 TBL1XR1Q9BZK7 514 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 NMUR2Q9GZQ4 415 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 C5orf66Q9H5L9 145 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 EXO5Q9H790 373 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 VIPAS39Q9H9C1 493 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 NMRAL1Q9HBL8 299 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 NOX3Q9HBY0 568 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 SLC17A5Q9NRA2 495 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 MAN2C1Q9NTJ4 1040 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 PAQR5Q9NXK6 330 aaPredicted RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 CD274Q9NZQ7 290 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 KLRF1Q9NZS2 232 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 PDP1Q9P0J1 537 aaPredicted RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 MYEF2Q9P2K5 600 aaKnown RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 IL19Q9UHD0 177 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 ATP6V1HQ9UI12 483 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 KLHL21Q9UJP4 597 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 FOXA2Q9Y261 457 aaPredicted RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 CFL2Q9Y281 166 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 FLVCR1Q9Y5Y0 555 aa1.94□□□□□ -2.1
CPSF6-207ENST00000551516 SOX21Q9Y651 276 aaPredicted RBP1.94□□□□□ -2.1
CPSF6-207ENST00000551516 DSPPQ9NZW4 1301 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 IGKV1D-42A0A075B6H8 117 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 IGLV3-9A0A075B6K5 115 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 A0A087WW49 117 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 IGHV3-15A0A0B4J1V0 119 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TRBV2A0A0J9YWF9 115 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 LOC102725191A0A1B0GVB3 256 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 IQCMA0A1B0GVH7 501 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 A0A1B0GWJ7 208 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 A0A1W2PR80 420 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 MSGN1A6NI15 193 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 GOLGA6L10A6NI86 522 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 NKX6-3A6NJ46 265 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 CLDN24A6NM45 220 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF732B4DXR9 585 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 C9JVG2 144 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ATP6V1G2-DDX39BF2Z307 99 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 LYNX1G3V0Z9 82 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 CLDN34H7C241 214 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 LSM1O15116 133 aaKnown RBP1.93□□□□□ -2.1
CPSF6-207ENST00000551516 CLOCKO15516 846 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 SYT7O43581 403 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 EIF4E2O60573 245 aaKnown RBP1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TPST2O60704 377 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ATP6V1G1O75348 118 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 SEC22BO75396 215 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 SAP30O75446 220 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 GMNNO75496 209 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 LYPD3O95274 346 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TGFAP01135 160 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 UQCRHP07919 91 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 FGF4P08620 206 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TPM1P09493 284 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TSPAN19P0C672 248 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 CECR9P0C854 216 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 LYNX1P0DP58 116 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 LAMP1P11279 417 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF14P17017 642 aaPredicted RBP1.93□□□□□ -2.1
CPSF6-207ENST00000551516 IMPDH1P20839 514 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 GABRA3P34903 492 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 SPRP35270 261 aaPredicted RBP1.93□□□□□ -2.1
CPSF6-207ENST00000551516 DEKP35659 375 aaKnown RBP1.93□□□□□ -2.1
CPSF6-207ENST00000551516 MAGEA4P43358 317 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 PPOXP50336 477 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ATP12AP54707 1039 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TPM4P67936 248 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 MRPS11P82912 194 aaKnown RBP1.93□□□□□ -2.1
CPSF6-207ENST00000551516 GALK2Q01415 458 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 DR1Q01658 176 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 NAAAQ02083 359 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms