RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 INSIG2Q9Y5U4 225 aa9.15□□□□□ -0.94
VTI1BP3-201ENST00000550220 ANK2Q01484 3957 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 GMDSO60547 372 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 GPANK1O95872 356 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 FSHBP01225 129 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 RPS2P15880 293 aaKnown RBP9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 HOXB6P17509 224 aaKnown RBP9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 MSX2P35548 267 aaPredicted RBP9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 MAGEA2P43356 314 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 PAX8Q06710 450 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 GK2Q14410 553 aaPredicted RBP9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 FAM98BQ52LJ0 330 aaKnown RBP9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 CLEC12AQ5QGZ9 265 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 SLC35F1Q5T1Q4 408 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 OTPQ5XKR4 325 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 DRAM2Q6UX65 266 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 CFAP77Q6ZQR2 320 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 RASSF6Q6ZTQ3 369 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 MRPL21Q7Z2W9 205 aaKnown RBP9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 KLBQ86Z14 1044 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 LINC00346Q8IVM7 164 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 C3orf56Q8N813 242 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 SPERTQ8NA61 448 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 DEFB108BQ8NET1 73 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 SDR9C7Q8NEX9 313 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 PROKR2Q8NFJ6 384 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 OR10AD1Q8NGE0 317 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 Q8TCH9 128 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 SLCO4A1Q96BD0 722 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 NSL1Q96IY1 281 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 DDOQ99489 341 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 SSBP3Q9BWW4 388 aaPredicted RBP9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 OPA3Q9H6K4 179 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 SP140LQ9H930 580 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 TRIM36Q9NQ86 728 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 MMP26Q9NRE1 261 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 DCAF16Q9NXF7 216 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 PPIAL4AQ9Y536 164 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 LYVE1Q9Y5Y7 322 aa9.14□□□□□ -0.95
VTI1BP3-201ENST00000550220 CEACAM18A8MTB9 384 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 B2RBV5 119 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 TRAPPC2LH3BP13 241 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 M0R135 149 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 BHLHE40O14503 412 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 GASTP01350 101 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 IFNGP01579 166 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 APOC1P02654 83 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 CFPP27918 469 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 FMO3P31513 532 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 CD200P41217 278 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 SLC15A1P46059 708 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 MTNR1AP48039 350 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 ERFP50548 548 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 SLC25A1P53007 311 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 GNB2P62879 340 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 TRIM25Q14258 630 aaKnown RBP9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 TAF13Q15543 124 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 MICAQ29983 383 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 TEX30Q5JUR7 227 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 ZNF770Q6IQ21 691 aaPredicted RBP9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 ZNF771Q7L3S4 317 aaPredicted RBP9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 MOGAT3Q86VF5 341 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 DHFR2Q86XF0 187 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 LNX2Q8N448 690 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 BHLHE23Q8NDY6 225 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 OR2T33Q8NG76 320 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 OR8B3Q8NGG8 313 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 DVL3Q92997 716 aaPredicted RBP9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 NEIL1Q96FI4 390 aaPredicted RBP9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 ZNF799Q96GE5 643 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 OR8B2Q96RD0 313 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 SLC6A7Q99884 636 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 DGCR6LQ9BY27 220 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 EGLN3Q9H6Z9 239 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 REEP1Q9H902 201 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 FN3KRPQ9HA64 309 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 PNRC2Q9NPJ4 139 aaKnown RBP9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 TBC1D23Q9NUY8 699 aa9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 MRPL22Q9NWU5 206 aaKnown RBP9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 MRPL15Q9P015 296 aaKnown RBP9.13□□□□□ -0.95
VTI1BP3-201ENST00000550220 NBEAL1Q6ZS30 2694 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 GGT3PA6NGU5 568 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 F5H5P2 479 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 MLNRO43193 412 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 NDUFA2O43678 99 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 RGS9O75916 674 aaPredicted RBP9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 LIPFP07098 398 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 CALB2P22676 271 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 OTX1P32242 354 aaPredicted RBP9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 DDOSTP39656 456 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 ENTPD1P49961 510 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 NPY4RP50391 375 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 BPIFB3P59826 476 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 FOXL1Q12952 345 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 OR8G1Q15617 311 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 PCK2Q16822 640 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 C11orf91Q3C1V1 193 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 ZNF404Q494X3 552 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 LCN8Q6JVE9 175 aa9.12□□□□□ -0.95
VTI1BP3-201ENST00000550220 CD300LDQ6UXZ3 194 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms