RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 MKXQ8IYA7 352 aa2.72□□□□□ -1.97
SNRPF-202ENST00000549580 ST13P4Q8IZP2 240 aaPredicted RBP2.72□□□□□ -1.97
SNRPF-202ENST00000549580 TCAIMQ8N3R3 496 aa2.72□□□□□ -1.97
SNRPF-202ENST00000549580 KIF2BQ8N4N8 673 aa2.72□□□□□ -1.97
SNRPF-202ENST00000549580 CBR4Q8N4T8 237 aa2.72□□□□□ -1.97
SNRPF-202ENST00000549580 ZNF433Q8N7K0 673 aaPredicted RBP2.72□□□□□ -1.97
SNRPF-202ENST00000549580 OR10W1Q8NGF6 305 aa2.72□□□□□ -1.97
SNRPF-202ENST00000549580 NTAN1Q96AB6 310 aa2.72□□□□□ -1.97
SNRPF-202ENST00000549580 EXOSC8Q96B26 276 aaKnown RBP2.72□□□□□ -1.97
SNRPF-202ENST00000549580 BTN2A3PQ96KV6 586 aa2.72□□□□□ -1.97
SNRPF-202ENST00000549580 RPP21Q9H633 154 aaKnown RBP2.72□□□□□ -1.97
SNRPF-202ENST00000549580 ASB8Q9H765 288 aa2.72□□□□□ -1.97
SNRPF-202ENST00000549580 UBE2ZQ9H832 354 aaPredicted RBP2.72□□□□□ -1.97
SNRPF-202ENST00000549580 SLC40A1Q9NP59 571 aa2.72□□□□□ -1.97
SNRPF-202ENST00000549580 ZNF331Q9NQX6 463 aaPredicted RBP2.72□□□□□ -1.97
SNRPF-202ENST00000549580 FAM49BQ9NUQ9 324 aa2.72□□□□□ -1.97
SNRPF-202ENST00000549580 ADA2Q9NZK5 511 aa2.72□□□□□ -1.97
SNRPF-202ENST00000549580 MTFP1Q9UDX5 166 aa2.72□□□□□ -1.97
SNRPF-202ENST00000549580 NEU3Q9UQ49 428 aa2.72□□□□□ -1.97
SNRPF-202ENST00000549580 PIK3R4Q99570 1358 aa2.72□□□□□ -1.97
SNRPF-202ENST00000549580 TDRD6O60522 2096 aaKnown RBP2.72□□□□□ -1.97
SNRPF-202ENST00000549580 MTCL1Q9Y4B5 1905 aaKnown RBP2.72□□□□□ -1.97
SNRPF-202ENST00000549580 MROH7Q68CQ1 1323 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 ANKRD65E5RJM6 399 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 H0Y9J4 135 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 H7C1H1 209 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 HLA-DPB1P04440 258 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 CD3GP09693 182 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 PGA4P0DJD7 388 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 PGA3P0DJD8 388 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 PRPS2P11908 318 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 GABRG2P18507 467 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 MDKP21741 143 aaPredicted RBP2.71□□□□□ -1.98
SNRPF-202ENST00000549580 CD151P48509 253 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 CSNK1A1P48729 337 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 TAS2R39P59534 338 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 PSMC5P62195 406 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 MECOMQ03112 1051 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 ART3Q13508 389 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 TFDP2Q14188 446 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 GINS1Q14691 196 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 METTL21CQ5VZV1 264 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 PRMT9Q6P2P2 845 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 FAM92BQ6ZTR7 304 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 FAM86B1Q8N7N1 296 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 ARIH2OSQ8N7S6 290 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 SNX31Q8N9S9 440 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 NDNFQ8TB73 568 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 ABHD3Q8WU67 409 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 ASZ1Q8WWH4 475 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 FAM104AQ969W3 186 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 SGTBQ96EQ0 304 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 DYNLL2Q96FJ2 89 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 ARMC7Q9H6L4 198 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 KIR3DX1Q9H7L2 352 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 NOX3Q9HBY0 568 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 NYAP2Q9P242 653 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 ZMAT5Q9UDW3 170 aaKnown RBP2.71□□□□□ -1.98
SNRPF-202ENST00000549580 TRMT112Q9UI30 125 aaKnown RBP2.71□□□□□ -1.98
SNRPF-202ENST00000549580 CELA1Q9UNI1 258 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 AQRO60306 1485 aaKnown RBP eCLIP2.71□□□□□ -1.982e-6■□□□□ 8.7
SNRPF-202ENST00000549580 CDC42BPBQ9Y5S2 1711 aa2.71□□□□□ -1.98
SNRPF-202ENST00000549580 ASTN1O14525 1302 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 TET2Q6N021 2002 aaPredicted RBP2.7□□□□□ -1.98
SNRPF-202ENST00000549580 IGHV5-51A0A0C4DH38 117 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 A0A1B0GVX0 72 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 PDZK1P1A8MUH7 402 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 INS-IGF2F8WCM5 200 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 POLR3GO15318 223 aaPredicted RBP2.7□□□□□ -1.98
SNRPF-202ENST00000549580 CDC40O60508 579 aaKnown RBP eCLIP2.7□□□□□ -1.98
SNRPF-202ENST00000549580 GMDSO60547 372 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 NMT2O60551 498 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 RDH16O75452 317 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 GABARAPO95166 117 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 NPPAP01160 153 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 CATP04040 527 aaKnown RBP2.7□□□□□ -1.98
SNRPF-202ENST00000549580 BCHEP06276 602 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 TLX1NBP0CAT3 122 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 PSG2P11465 335 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 TCN2P20062 427 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 IL32P24001 234 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 IVDP26440 423 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 HCAR3P49019 387 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 P2RX1P51575 399 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 RPS23P62266 143 aaKnown RBP2.7□□□□□ -1.98
SNRPF-202ENST00000549580 TNNC1P63316 161 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 ERCC8Q13216 396 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 VAMP3Q15836 100 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 CEMP1Q6PRD7 247 aaPredicted RBP2.7□□□□□ -1.98
SNRPF-202ENST00000549580 NCCRP1Q6ZVX7 275 aaPredicted RBP2.7□□□□□ -1.98
SNRPF-202ENST00000549580 SNX20Q7Z614 316 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 C12orf56Q8IXR9 622 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 METTL13Q8N6R0 699 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 COX18Q8N8Q8 333 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 LILRB4Q8NHJ6 448 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 BAALCQ8WXS3 180 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 RGP1Q92546 391 aaPredicted RBP2.7□□□□□ -1.98
SNRPF-202ENST00000549580 TMIGD2Q96BF3 282 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 RNF170Q96K19 258 aa2.7□□□□□ -1.98
SNRPF-202ENST00000549580 ATP6V1G3Q96LB4 118 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms