RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 DUX4Q9UBX2 424 aa1.42□□□□□ -2.18
CCDC38-206ENST00000548771 PITPNC1Q9UKF7 332 aa1.42□□□□□ -2.18
CCDC38-206ENST00000548771 ATAD2BQ9ULI0 1458 aa1.42□□□□□ -2.18
CCDC38-206ENST00000548771 AKNAQ7Z591 1439 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 IGHV3OR16-8A0A075B7F1 116 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 IGHV3-49A0A0A0MS15 119 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 IGHV1-69DA0A0B4J2H0 117 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 IGKV1-8A0A0C4DH67 115 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 OR5H1A6NKK0 313 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 NCBP2LA6PVI3 153 aaKnown RBP1.41□□□□□ -2.18
CCDC38-206ENST00000548771 PLPP1O14494 284 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 RNF13O43567 381 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 CLDN11O75508 207 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 WBP4O75554 376 aaKnown RBP1.41□□□□□ -2.18
CCDC38-206ENST00000548771 PAHP00439 452 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 SERPINE2P07093 398 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 ATF6P18850 670 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 PRLHRP49683 370 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 GFERP55789 205 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 TAS2R46P59540 309 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 RAB10P61026 200 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 PRKCDQ05655 676 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 PPIDQ08752 370 aaKnown RBP1.41□□□□□ -2.18
CCDC38-206ENST00000548771 BAMBIQ13145 260 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 ART3Q13508 389 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 DGCR6Q14129 220 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 DMC1Q14565 340 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 MRPL23Q16540 153 aaKnown RBP1.41□□□□□ -2.18
CCDC38-206ENST00000548771 TEX30Q5JUR7 227 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 C22orf42Q6IC83 251 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 MBOAT2Q6ZWT7 520 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 TAS2R42Q7RTR8 314 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 FAM71AQ8IYT1 594 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 SPANXA2-OT1Q8N9U9 137 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 C11orf72Q8NBR9 251 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 GPR26Q8NDV2 337 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 OR4A4PQ8NGN8 299 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 OR5M1Q8NGP8 315 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 OR1J4Q8NGS1 313 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 ACMSDQ8TDX5 336 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 NUP58Q9BVL2 599 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 MED4Q9NPJ6 270 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 RHBDL2Q9NX52 303 aa1.41□□□□□ -2.18
CCDC38-206ENST00000548771 THADAQ6YHU6 1953 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.4□□□□□ -2.19
CCDC38-206ENST00000548771 SMIM26A0A096LP01 95 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 XKRY2A2RUG3 117 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 C9JVG2 144 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 H7C1H1 209 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 K7EMT4 169 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 NDUFAB1O14561 156 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 SCAMP2O15127 329 aaKnown RBP1.4□□□□□ -2.19
CCDC38-206ENST00000548771 FLOT1O75955 427 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 GLSO94925 669 aaPredicted RBP1.4□□□□□ -2.19
CCDC38-206ENST00000548771 PTMSP20962 102 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 PSMB5P28074 263 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 RAB7AP51149 207 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 RPS11P62280 158 aaKnown RBP eCLIP1.4□□□□□ -2.19
CCDC38-206ENST00000548771 RBX1P62877 108 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 TRAM2Q15035 370 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 TPTE2P1Q5T6R2 138 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 TTC23LQ6PF05 361 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 NPSR1Q6W5P4 371 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 ZNF101Q8IZC7 436 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 ZNF645Q8N7E2 425 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 ZNF680Q8NEM1 530 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 C1orf64Q8NEQ6 169 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 OR5T1Q8NG75 326 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 OR6Q1Q8NGQ2 317 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 OR10G6Q8NH81 332 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 LYPD6BQ8NI32 183 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 ELMO1Q92556 727 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 SLC38A4Q969I6 547 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 WDR34Q96EX3 536 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 IP6K3Q96PC2 410 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 RHOXF2Q9BQY4 288 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 ANKRD60Q9BZ19 345 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 RETNQ9HD89 108 aa1.4□□□□□ -2.19
CCDC38-206ENST00000548771 IGHV3-72A0A0B4J1Y9 119 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 IGHV1-3A0A0C4DH29 117 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 A0A0J9YXV3 536 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 GOLGA8OA6NCC3 632 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 GOLGA8NF8WBI6 632 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 AP3B1O00203 1094 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 EIF3HO15372 352 aaKnown RBP eCLIP1.39□□□□□ -2.19
CCDC38-206ENST00000548771 PLIN3O60664 434 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 FTH1P02794 183 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 CSNK2A2P19784 350 aaPredicted RBP1.39□□□□□ -2.19
CCDC38-206ENST00000548771 CRISP1P54107 249 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 SIGLEC14Q08ET2 396 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 SELENBP1Q13228 472 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 NCF4Q15080 339 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 PGGHGQ32M88 737 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 HSP90AB3PQ58FF7 597 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 C1orf185Q5T7R7 199 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 FAM222AQ5U5X8 452 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 PRAMEF20Q5VT98 475 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 H3F3CQ6NXT2 135 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 OR5K2Q8NHB8 316 aa1.39□□□□□ -2.19
CCDC38-206ENST00000548771 ZNF606Q8WXB4 792 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms