RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 RAB27BO00194 218 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 ITGB2P05107 769 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 ABOP16442 354 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 RAB3AP20336 220 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 DSCR4P56555 118 aaPredicted RBP16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 UBE2MP61081 183 aaKnown RBP16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 PHYHD1Q5SRE7 291 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 ZNF468Q5VIY5 522 aaPredicted RBP16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 RAET1LQ5VY80 246 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 RPS19BP1Q86WX3 136 aaKnown RBP16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 MUC20Q8N307 709 aaPredicted RBP16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 FAM46BQ96A09 425 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 CMBLQ96DG6 245 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 RADILQ96JH8 1075 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 IRF2BPLQ9H1B7 796 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 MOB1AQ9H8S9 216 aa16.39■□□□□ 0.21
PRPF40B-208ENST00000548436 CNTRLQ7Z7A1 2325 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 MLF1P58340 268 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 ZNF260Q3ZCT1 412 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 SLC23A3Q6PIS1 610 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 TMEM156Q8N614 296 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 AQP3Q92482 292 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 UQCC2Q9BRT2 126 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 SLCO5A1Q9H2Y9 848 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 EXO5Q9H790 373 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 GLTPQ9NZD2 209 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 ZDBF2Q9HCK1 2354 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 RTTNQ86VV8 2226 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 UBE2QL1A1L167 161 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 METTL21EPA6NDL7 271 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 SLC22A5O76082 557 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 ZNF735P0CB33 412 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 VSIG8P0DPA2 414 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 FOLR3P41439 243 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 CAPZA1P52907 286 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 RAP2BP61225 183 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 ABHD12BQ7Z5M8 362 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 ZNF385AQ96PM9 386 aaKnown RBP16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 SPACA5Q96QH8 159 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 CITED4Q96RK1 184 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 UCN2Q96RP3 112 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 GPR84Q9NQS5 396 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 B3GNT2Q9NY97 397 aa16.38■□□□□ 0.21
PRPF40B-208ENST00000548436 TLX3O43711 291 aaPredicted RBP16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 SIX6O95475 246 aa16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 BPNT1O95861 308 aa16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 CYB5AP00167 134 aa16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 MELTFP08582 738 aa16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 ZNF17P17021 662 aa16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 ZNF20P17024 532 aa16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 CX3CR1P49238 355 aa16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 H2BFSP57053 126 aa16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 SGCAQ16586 387 aa16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 IDO2Q6ZQW0 420 aa16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 COMMD2Q86X83 199 aa16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 ZNF416Q9BWM5 594 aa16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 HPF1Q9NWY4 346 aa16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 SLC5A6Q9Y289 635 aa16.37■□□□□ 0.21
PRPF40B-208ENST00000548436 TECTAO75443 2155 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 PLSCR5A0PG75 271 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 E9PLN8 166 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 CD74P04233 296 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 AMY2AP04746 511 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 DHODHQ02127 395 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 LPAL2Q16609 132 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 UXS1Q8NBZ7 420 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 OR2AK2Q8NG84 335 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 OR4S1Q8NGB4 309 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 POFUT1Q9H488 388 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 DKKL1Q9UK85 242 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 ZNF736B4DX44 427 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 ENPP1P22413 925 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 ZNF93P35789 620 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 CSNK1A1P48729 337 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 RPS18P62269 152 aaKnown RBP16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 OC90Q02509 493 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 GRK1Q15835 563 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 B3GNTL1Q67FW5 361 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 RAB12Q6IQ22 244 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 FAM57BQ71RH2 274 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 FJX1Q86VR8 437 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 ANGPTL5Q86XS5 388 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 CDH26Q8IXH8 852 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 OR5AS1Q8N127 324 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 OR8H3Q8N146 312 aa16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 FAM71F1Q96KD3 344 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-208ENST00000548436 FREM2Q5SZK8 3169 aa16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 C5orf63A6NC05 138 aa16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 WDPCPO95876 746 aa16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 CFDP00746 253 aaPredicted RBP16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 CD63P08962 238 aa16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 CXCL2P19875 107 aa16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 EXOSC2Q13868 293 aaKnown RBP16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 CDNFQ49AH0 187 aa16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 C4orf46Q504U0 113 aa16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 AWAT2Q6E213 333 aa16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 CHMP1BQ7LBR1 199 aa16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 RTN4RL2Q86UN3 420 aa16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 ZNF283Q8N7M2 679 aa16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 CHST4Q8NCG5 386 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms