RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 IFT27Q9BW83 186 aa17■□□□□ 0.31
SSH1-207ENST00000547862 CDADC1Q9BWV3 514 aa17■□□□□ 0.31
SSH1-207ENST00000547862 OR52D1Q9H346 318 aa17■□□□□ 0.31
SSH1-207ENST00000547862 B9D1Q9UPM9 204 aa17■□□□□ 0.31
SSH1-207ENST00000547862 CCDC22O60826 627 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 TXNDC12O95881 172 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 PLATP00750 562 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 ACSM4P0C7M7 580 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 HIST1H1CP16403 213 aaKnown RBP16.99■□□□□ 0.31
SSH1-207ENST00000547862 NOS3P29474 1203 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 SLC6A6P31641 620 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 TRAP1Q12931 704 aaKnown RBP16.99■□□□□ 0.31
SSH1-207ENST00000547862 GK2Q14410 553 aaPredicted RBP16.99■□□□□ 0.31
SSH1-207ENST00000547862 DEFB112Q30KQ8 113 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 GLYATQ6IB77 296 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 SLC18B1Q6NT16 456 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 MRPL21Q7Z2W9 205 aaKnown RBP16.99■□□□□ 0.31
SSH1-207ENST00000547862 NAA40Q86UY6 237 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 OR6V1Q8N148 313 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 OR10S1Q8NGN2 331 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 OR11L1Q8NGX0 322 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 SPRYD4Q8WW59 207 aaPredicted RBP16.99■□□□□ 0.31
SSH1-207ENST00000547862 SLCO4A1Q96BD0 722 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 PCGF1Q9BSM1 259 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 NSRP1Q9H0G5 558 aaKnown RBP16.99■□□□□ 0.31
SSH1-207ENST00000547862 ADA2Q9NZK5 511 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 TMCC3Q9ULS5 477 aa16.99■□□□□ 0.31
SSH1-207ENST00000547862 SAMD4AQ9UPU9 718 aaKnown RBP16.99■□□□□ 0.31
SSH1-207ENST00000547862 TRRAPQ9Y4A5 3859 aa16.98■□□□□ 0.31
SSH1-207ENST00000547862 GMNNO75496 209 aa16.98■□□□□ 0.31
SSH1-207ENST00000547862 MDH1P40925 334 aaKnown RBP16.98■□□□□ 0.31
SSH1-207ENST00000547862 MALLQ13021 153 aa16.98■□□□□ 0.31
SSH1-207ENST00000547862 MAB21L1Q13394 359 aa16.98■□□□□ 0.31
SSH1-207ENST00000547862 OR8G1Q15617 311 aa16.98■□□□□ 0.31
SSH1-207ENST00000547862 ZNF181Q2M3W8 571 aa16.98■□□□□ 0.31
SSH1-207ENST00000547862 TREML4Q6UXN2 200 aa16.98■□□□□ 0.31
SSH1-207ENST00000547862 DCDC5Q6ZRR9 648 aa16.98■□□□□ 0.31
SSH1-207ENST00000547862 FITM2Q8N6M3 262 aa16.98■□□□□ 0.31
SSH1-207ENST00000547862 C7orf34Q96L11 122 aa16.98■□□□□ 0.31
SSH1-207ENST00000547862 ADAT1Q9BUB4 502 aaKnown RBP16.98■□□□□ 0.31
SSH1-207ENST00000547862 MARCH7Q9H992 704 aa16.98■□□□□ 0.31
SSH1-207ENST00000547862 ABCD2Q9UBJ2 740 aa16.98■□□□□ 0.31
SSH1-207ENST00000547862 C22orf46C9J442 243 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 CLDN34H7C241 214 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 NDUFAB1O14561 156 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 OR10H3O60404 316 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 GADD45GO95257 159 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 PPIAL4GP0DN37 164 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 RPS27P42677 84 aaKnown RBP16.97■□□□□ 0.31
SSH1-207ENST00000547862 RAD23AP54725 363 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 MPPED2Q15777 294 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 RSPO1Q2MKA7 263 aaPredicted RBP16.97■□□□□ 0.31
SSH1-207ENST00000547862 SLC36A3Q495N2 470 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 SLC35F1Q5T1Q4 408 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 GPR157Q5UAW9 335 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 WDR25Q64LD2 544 aaPredicted RBP16.97■□□□□ 0.31
SSH1-207ENST00000547862 SFRP4Q6FHJ7 346 aaPredicted RBP16.97■□□□□ 0.31
SSH1-207ENST00000547862 HACD2Q6Y1H2 254 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 C9orf139Q6ZV77 190 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 PGAP1Q75T13 922 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 TMIGD2Q96BF3 282 aa16.97■□□□□ 0.31
SSH1-207ENST00000547862 PHYHO14832 338 aa16.96■□□□□ 0.31
SSH1-207ENST00000547862 ENSAO43768 121 aaKnown RBP16.96■□□□□ 0.31
SSH1-207ENST00000547862 SFTPBP07988 381 aa16.96■□□□□ 0.31
SSH1-207ENST00000547862 CA6P23280 308 aa16.96■□□□□ 0.31
SSH1-207ENST00000547862 GGT2P36268 569 aa16.96■□□□□ 0.31
SSH1-207ENST00000547862 RFX4Q33E94 735 aa16.96■□□□□ 0.31
SSH1-207ENST00000547862 COLCA1Q6ZS62 124 aa16.96■□□□□ 0.31
SSH1-207ENST00000547862 LNX2Q8N448 690 aa16.96■□□□□ 0.31
SSH1-207ENST00000547862 DACT3Q96B18 629 aaPredicted RBP16.96■□□□□ 0.31
SSH1-207ENST00000547862 DHRS1Q96LJ7 313 aa16.96■□□□□ 0.31
SSH1-207ENST00000547862 FUZQ9BT04 418 aa16.96■□□□□ 0.31
SSH1-207ENST00000547862 CCDC134Q9H6E4 229 aa16.96■□□□□ 0.31
SSH1-207ENST00000547862 SPAG4Q9NPE6 437 aa16.96■□□□□ 0.31
SSH1-207ENST00000547862 DCAF13Q9NV06 445 aaKnown RBP16.96■□□□□ 0.31
SSH1-207ENST00000547862 KIR2DS1A0A191URI9 304 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 C3orf80F5H4A9 247 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 M0R135 149 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 PYCR1P32322 319 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 CD200P41217 278 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 GATA4P43694 442 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 OR8B8Q15620 311 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 SNAI3Q3KNW1 292 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 KRTAP27-1Q3LI81 207 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 CLEC12AQ5QGZ9 265 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 C16orf87Q6PH81 154 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 OR2AE1Q8NHA4 323 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 ZNF799Q96GE5 643 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 PNRC2Q9NPJ4 139 aaKnown RBP16.95■□□□□ 0.3
SSH1-207ENST00000547862 CTSZQ9UBR2 303 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 N6AMT1Q9Y5N5 214 aa16.95■□□□□ 0.3
SSH1-207ENST00000547862 OR6C68A6NDL8 312 aa16.94■□□□□ 0.3
SSH1-207ENST00000547862 FAM181BA6NEQ2 426 aa16.94■□□□□ 0.3
SSH1-207ENST00000547862 TVP23AA6NH52 213 aa16.94■□□□□ 0.3
SSH1-207ENST00000547862 ANOS1P23352 680 aa16.94■□□□□ 0.3
SSH1-207ENST00000547862 CPT2P23786 658 aa16.94■□□□□ 0.3
SSH1-207ENST00000547862 TPTEP56180 551 aa16.94■□□□□ 0.3
SSH1-207ENST00000547862 DEFA6Q01524 100 aa16.94■□□□□ 0.3
SSH1-207ENST00000547862 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.94■□□□□ 0.3
SSH1-207ENST00000547862 SRSF4Q08170 494 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms