RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 E9PCH4 1651 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 SSH2Q76I76 1423 aa3.26□□□□□ -1.89
SCAF11-210ENST00000547654 PAPPA2Q9BXP8 1791 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 UBR3Q6ZT12 1888 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 TRPM7Q96QT4 1865 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 IGHV3OR16-10A0A075B7F0 116 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 FAM166BA8MTA8 275 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 HACD1B0YJ81 288 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 SHISA9B4DS77 424 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 SEC14L6B5MCN3 397 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 ERVV-1B6SEH8 477 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 CDX4O14627 284 aaPredicted RBP3.25□□□□□ -1.89
SCAF11-210ENST00000547654 NUPL2O15504 423 aaKnown RBP3.25□□□□□ -1.89
SCAF11-210ENST00000547654 DPM1O60762 260 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 LYPLA1O75608 230 aaPredicted RBP3.25□□□□□ -1.89
SCAF11-210ENST00000547654 SC5DO75845 299 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 SNAPINO95295 136 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 CATP04040 527 aaKnown RBP3.25□□□□□ -1.89
SCAF11-210ENST00000547654 CCDC166P0CW27 439 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 CSNK2A2P19784 350 aaPredicted RBP3.25□□□□□ -1.89
SCAF11-210ENST00000547654 RAB4AP20338 218 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 AK4P27144 223 aaPredicted RBP3.25□□□□□ -1.89
SCAF11-210ENST00000547654 CD40LGP29965 261 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 FMO3P31513 532 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 SERPINB5P36952 375 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 SLC25A1P53007 311 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 SLC39A6Q13433 755 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 OR7A5Q15622 319 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 TNXAQ16473 311 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 C1orf100Q5SVJ3 147 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 ZNF691Q5VV52 312 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 UBE2UQ5VVX9 321 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 DUPD1Q68J44 220 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 RWDD4Q6NW29 188 aaKnown RBP3.25□□□□□ -1.89
SCAF11-210ENST00000547654 ZNF620Q6ZNG0 422 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 MOB1BQ7L9L4 216 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 SSX6Q7RTT6 188 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 PRSS41Q7RTY9 318 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 ABHD12BQ7Z5M8 362 aaPredicted RBP3.25□□□□□ -1.89
SCAF11-210ENST00000547654 ZNF589Q86UQ0 364 aaPredicted RBP3.25□□□□□ -1.89
SCAF11-210ENST00000547654 SLC25A42Q86VD7 318 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 HORMAD1Q86X24 394 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 PLCZ1Q86YW0 608 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 TMEM252Q8N6L7 170 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 LINC00469Q8N7U9 141 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 OR6K2Q8NGY2 324 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 OR51E1Q8TCB6 317 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 OR8D1Q8WZ84 308 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 GTF2H4Q92759 462 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 RPEQ96AT9 228 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 ATOH8Q96SQ7 321 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 P2RX4Q99571 388 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 TSG101Q99816 390 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 FOXC2Q99958 501 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 EBF4Q9BQW3 602 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 RIOK2Q9BVS4 552 aaKnown RBP3.25□□□□□ -1.89
SCAF11-210ENST00000547654 POLR2J2Q9GZM3 115 aaKnown RBP3.25□□□□□ -1.89
SCAF11-210ENST00000547654 POLR2J3Q9H1A7 115 aaKnown RBP3.25□□□□□ -1.89
SCAF11-210ENST00000547654 C1orf198Q9H425 327 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 PTGES2Q9H7Z7 377 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 SLC22A14Q9Y267 594 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 VSIG4Q9Y279 399 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 MOB4Q9Y3A3 225 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 HYOU1Q9Y4L1 999 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 STYXL1Q9Y6J8 313 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 SBNO1A3KN83 1393 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 BRD4O60885 1362 aaPredicted RBP3.25□□□□□ -1.89
SCAF11-210ENST00000547654 LRPPRCP42704 1394 aaKnown RBP3.25□□□□□ -1.89
SCAF11-210ENST00000547654 KIAA0232Q92628 1395 aa3.25□□□□□ -1.89
SCAF11-210ENST00000547654 MROH7Q68CQ1 1323 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 ZFHX4Q86UP3 3567 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 A0A0G2JLM5 398 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 C1orf232A0A0U1RR37 186 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 RNASEK-C17orf49H0YIS7 233 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 NDUFS6O75380 124 aaKnown RBP3.24□□□□□ -1.89
SCAF11-210ENST00000547654 KLHL2O95198 593 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 AIFM1O95831 613 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 DNASE1L1P49184 302 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 DLX1P56177 255 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 TAS2R60P59551 318 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 UBE2KP61086 200 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 NUTF2P61970 127 aaKnown RBP3.24□□□□□ -1.89
SCAF11-210ENST00000547654 UBE2IP63279 158 aaKnown RBP3.24□□□□□ -1.89
SCAF11-210ENST00000547654 TGFBR3Q03167 851 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 PAX8Q06710 450 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 ZNF726P1Q15940 193 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 KRTAP13-3Q3SY46 172 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 CD300LGQ6UXG3 332 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 NAXDQ8IW45 347 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 C6orf223Q8N319 242 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 DNAAF3Q8N9W5 541 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 VN1R2Q8NFZ6 395 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 TMEM230Q96A57 120 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 ZNF396Q96N95 335 aaPredicted RBP3.24□□□□□ -1.89
SCAF11-210ENST00000547654 SCGB3A2Q96PL1 93 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 SMIM14Q96QK8 99 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 SH3GL3Q99963 347 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 COPS4Q9BT78 406 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 TRIM15Q9C019 465 aa3.24□□□□□ -1.89
SCAF11-210ENST00000547654 NECAP2Q9NVZ3 263 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms