RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 TAF13Q15543 124 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 KCNMB1Q16558 191 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 ZNF260Q3ZCT1 412 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 TMEM81Q6P7N7 255 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 OPN5Q6U736 354 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 TMPPEQ6ZT21 453 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 CHMP1BQ7LBR1 199 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 GTPBP8Q8N3Z3 284 aaPredicted RBP13.75□□□□□ -0.21
BRF1-212ENST00000547562 AGBL5Q8NDL9 886 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 CCDC107Q8WV48 283 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 FAM46BQ96A09 425 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 PTRH2Q9Y3E5 179 aaKnown RBP13.75□□□□□ -0.21
BRF1-212ENST00000547562 A0A087WZY1 265 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 RPS10-NUDT3A0A1W2PQS6 291 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 L7N2F9 121 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 NTN3O00634 580 aaPredicted RBP13.75□□□□□ -0.21
BRF1-212ENST00000547562 RER1O15258 196 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 VSIG8P0DPA2 414 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 ZNF35P13682 527 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 ENPP1P22413 925 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 OC90Q02509 493 aaPredicted RBP13.75□□□□□ -0.21
BRF1-212ENST00000547562 POU4F3Q15319 338 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 EXT1Q16394 746 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 CLLU1Q5K131 121 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 ZNF584Q8IVC4 421 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 PNRC2Q9NPJ4 139 aaKnown RBP13.75□□□□□ -0.21
BRF1-212ENST00000547562 SLC5A6Q9Y289 635 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 MAB21L2Q9Y586 359 aa13.75□□□□□ -0.21
BRF1-212ENST00000547562 MCRIP1C9JLW8 97 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 F5H5P2 479 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 KLF7O75840 302 aaPredicted RBP13.74□□□□□ -0.21
BRF1-212ENST00000547562 RGS11O94810 467 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 PMS2P2O95744 297 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 ERCC1P07992 297 aaPredicted RBP13.74□□□□□ -0.21
BRF1-212ENST00000547562 ZNF20P17024 532 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 ZNF121P58317 390 aaPredicted RBP13.74□□□□□ -0.21
BRF1-212ENST00000547562 MPPED2Q15777 294 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 DCAF12L2Q5VW00 463 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 BPIFB2Q8N4F0 458 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 OR8B12Q8NGG6 310 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 HS3ST3B1Q9Y662 390 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 OR4E1P0C645 316 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 SLC2A1P11166 492 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 CCL4P13236 92 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 CLDN17P56750 224 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 TRA2AQ13595 282 aaKnown RBP eCLIP13.74□□□□□ -0.21
BRF1-212ENST00000547562 ABHD12BQ7Z5M8 362 aaPredicted RBP13.74□□□□□ -0.21
BRF1-212ENST00000547562 FJX1Q86VR8 437 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 CMBLQ96DG6 245 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 FBLN5Q9UBX5 448 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 FARSAQ9Y285 508 aaKnown RBP13.74□□□□□ -0.21
BRF1-212ENST00000547562 SDK2Q58EX2 2172 aa13.74□□□□□ -0.21
BRF1-212ENST00000547562 HMSDA8MTL9 139 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 PATE3B3GLJ2 98 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 C9J4A7 227 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 H3BUI4 141 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 TLX3O43711 291 aaPredicted RBP13.73□□□□□ -0.21
BRF1-212ENST00000547562 CCL3P10147 92 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 ZNF93P35789 620 aaPredicted RBP13.73□□□□□ -0.21
BRF1-212ENST00000547562 SEC61A1P61619 476 aaKnown RBP13.73□□□□□ -0.21
BRF1-212ENST00000547562 H3F3AP84243 136 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 RIPPLY1Q0D2K3 151 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 PEAR1Q5VY43 1037 aaPredicted RBP13.73□□□□□ -0.21
BRF1-212ENST00000547562 TMED4Q7Z7H5 227 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 COMMD2Q86X83 199 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 OR4S1Q8NGB4 309 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 ANGPTL6Q8NI99 470 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 M1APQ8TC57 530 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 SFXN2Q96NB2 322 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 SLC6A7Q99884 636 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 EDEM2Q9BV94 578 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 ANGPTL4Q9BY76 406 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 MYOZ1Q9NP98 299 aaPredicted RBP13.73□□□□□ -0.21
BRF1-212ENST00000547562 KIAA1549Q9HCM3 1950 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 TEX51A0A1B0GUA7 166 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 SCGNO76038 276 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 PDGFBP01127 241 aaPredicted RBP13.73□□□□□ -0.21
BRF1-212ENST00000547562 ABOP16442 354 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 CX3CR1P49238 355 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 ZFP36L1Q07352 338 aaKnown RBP13.73□□□□□ -0.21
BRF1-212ENST00000547562 MEF2DQ14814 521 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 CDNFQ49AH0 187 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 ATPAF1Q5TC12 328 aaPredicted RBP13.73□□□□□ -0.21
BRF1-212ENST00000547562 AWAT2Q6E213 333 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 C11orf88Q6PI97 169 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 TRAPPC6BQ86SZ2 158 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 ANGPTL5Q86XS5 388 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 CHST4Q8NCG5 386 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 ASB13Q8WXK3 278 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 GNRHR2Q96P88 292 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 SOX7Q9BT81 388 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 PROK2Q9HC23 129 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 GPR84Q9NQS5 396 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 ZNF319Q9P2F9 582 aa13.73□□□□□ -0.21
BRF1-212ENST00000547562 OR6C65A6NJZ3 312 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 TMEM14DPA8MWL7 114 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 ANOS1P23352 680 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 DUSP3P51452 185 aaPredicted RBP13.72□□□□□ -0.21
BRF1-212ENST00000547562 SSR4P51571 173 aa13.72□□□□□ -0.21
BRF1-212ENST00000547562 MC2RQ01718 297 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms