RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 FBXL2Q9UKC9 423 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 OR52A1Q9UKL2 312 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 WIF1Q9Y5W5 379 aa5.78□□□□□ -1.48
SNHG1-225ENST00000545920 IGKV3D-11A0A0A0MRZ8 115 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 A0A0A6YYC8 382 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-225ENST00000545920 SPTY2D1-AS1A0A0U1RR47 76 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 LOC107986453A0A1B0GWG9 222 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 TLCD2A6NGC4 264 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 C17orf105B2RV13 164 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 I3L1I5 382 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-225ENST00000545920 ETV2O00321 342 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-225ENST00000545920 DCTN6O00399 190 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 PLPP3O14495 311 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 PAX4O43316 350 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 ZNF208O43345 1280 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 TSPAN2O60636 221 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 SLC16A7O60669 478 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 STK17BO94768 372 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 KDM4BO94953 1096 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 SIX6O95475 246 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 KLF8O95600 359 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-225ENST00000545920 SEMA4FO95754 770 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 HLA-DQA2P01906 255 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 F13BP05160 661 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 CRHP06850 196 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 PROS1P07225 676 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 CTSEP14091 401 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 FOLR2P14207 255 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 PVRP15151 417 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 ST6GAL1P15907 406 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 GRPRP30550 384 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 APOBEC1P41238 236 aaKnown RBP5.77□□□□□ -1.49
SNHG1-225ENST00000545920 CAPZBP47756 277 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 GABRA4P48169 554 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 CCR4P51679 360 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 LUMP51884 338 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-225ENST00000545920 TAS2R46P59540 309 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 EIF2B1Q14232 305 aaKnown RBP5.77□□□□□ -1.49
SNHG1-225ENST00000545920 TAF13Q15543 124 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 CD226Q15762 336 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 C2orf68Q2NKX9 166 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 C1orf140Q5VVS0 124 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 PRSS54Q6PEW0 395 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 KLHL24Q6TFL4 600 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 BEND4Q6ZU67 534 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 SLC29A4Q7RTT9 530 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 PARGQ86W56 976 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 HOGA1Q86XE5 327 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 TMEM151BQ8IW70 566 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 SHISA5Q8N114 240 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 BPIFCQ8NFQ6 507 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 SLC26A10Q8NG04 563 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 OR1M1Q8NGA1 313 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 OR4D10Q8NGI6 311 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 OR1J2Q8NGS2 313 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 MFSD8Q8NHS3 518 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 CCL4L1Q8NHW4 92 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 KCNG3Q8TAE7 436 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 RNF133Q8WVZ7 376 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 ADIPOR1Q96A54 375 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 KTI12Q96EK9 354 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-225ENST00000545920 PIK3IP1Q96FE7 263 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 ZDHHC12Q96GR4 267 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 NARS2Q96I59 477 aaKnown RBP5.77□□□□□ -1.49
SNHG1-225ENST00000545920 MRGPRX1Q96LB2 322 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 TSSK2Q96PF2 358 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 AQP10Q96PS8 301 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 TSNAXQ99598 290 aaKnown RBP5.77□□□□□ -1.49
SNHG1-225ENST00000545920 PTDSS2Q9BVG9 487 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 TBL1XR1Q9BZK7 514 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 PCED1AQ9H1Q7 454 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 SLC6A17Q9H1V8 727 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 CHMP1AQ9HD42 196 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-225ENST00000545920 PDE7BQ9NP56 450 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 G6PC2Q9NQR9 355 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 TMEM74BQ9NUR3 256 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 COPS7AQ9UBW8 275 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 ZNF629Q9UEG4 869 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-225ENST00000545920 ATPIF1Q9UII2 106 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 GTF2A1LQ9UNN4 478 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 DTX4Q9Y2E6 619 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 LRP12Q9Y561 859 aa5.77□□□□□ -1.49
SNHG1-225ENST00000545920 PTPRSQ13332 1948 aa5.76□□□□□ -1.49
SNHG1-225ENST00000545920 TMED7-TICAM2A0A0A6YYA0 188 aa5.76□□□□□ -1.49
SNHG1-225ENST00000545920 A0A1W2PNV4 684 aa5.76□□□□□ -1.49
SNHG1-225ENST00000545920 FAM171A2A8MVW0 826 aa5.76□□□□□ -1.49
SNHG1-225ENST00000545920 TMEM14DPA8MWL7 114 aa5.76□□□□□ -1.49
SNHG1-225ENST00000545920 H0YC42 278 aa5.76□□□□□ -1.49
SNHG1-225ENST00000545920 RAB27BO00194 218 aa5.76□□□□□ -1.49
SNHG1-225ENST00000545920 PSMD9O00233 223 aa5.76□□□□□ -1.49
SNHG1-225ENST00000545920 HCRTR2O43614 444 aa5.76□□□□□ -1.49
SNHG1-225ENST00000545920 NARSO43776 548 aaKnown RBP5.76□□□□□ -1.49
SNHG1-225ENST00000545920 GAPDHP04406 335 aaKnown RBP5.76□□□□□ -1.49
SNHG1-225ENST00000545920 CYC1P08574 325 aa5.76□□□□□ -1.49
SNHG1-225ENST00000545920 SPARCP09486 303 aa5.76□□□□□ -1.49
SNHG1-225ENST00000545920 PRKACAP17612 351 aa5.76□□□□□ -1.49
SNHG1-225ENST00000545920 PVALBP20472 110 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-225ENST00000545920 FPR2P25090 351 aa5.76□□□□□ -1.49
SNHG1-225ENST00000545920 MST1P26927 711 aa5.76□□□□□ -1.49
SNHG1-225ENST00000545920 CD1CP29017 333 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms