RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 CST7O76096 145 aa7.88□□□□□ -1.15
ATXN3-216ENST00000545170 CTSAP10619 480 aa7.88□□□□□ -1.15
ATXN3-216ENST00000545170 SLC6A1P30531 599 aa7.88□□□□□ -1.15
ATXN3-216ENST00000545170 GNG4P50150 75 aa7.88□□□□□ -1.15
ATXN3-216ENST00000545170 IHHQ14623 411 aa7.88□□□□□ -1.15
ATXN3-216ENST00000545170 Q56UQ5 140 aa7.88□□□□□ -1.15
ATXN3-216ENST00000545170 ADAMTS17Q8TE56 1095 aa7.88□□□□□ -1.15
ATXN3-216ENST00000545170 TEX37Q96LM6 180 aa7.88□□□□□ -1.15
ATXN3-216ENST00000545170 RHNO1Q9BSD3 238 aa7.88□□□□□ -1.15
ATXN3-216ENST00000545170 CBLN4Q9NTU7 201 aa7.88□□□□□ -1.15
ATXN3-216ENST00000545170 OR52A4PA6NMU1 304 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 SLC2A10O95528 541 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 F12P00748 615 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-216ENST00000545170 FIGLAQ6QHK4 219 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 ACOT4Q8N9L9 421 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 PINX1Q96BK5 328 aaKnown RBP7.87□□□□□ -1.15
ATXN3-216ENST00000545170 NDFIP1Q9BT67 221 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 ISG20L2Q9H9L3 353 aaKnown RBP7.87□□□□□ -1.15
ATXN3-216ENST00000545170 OR51B4Q9Y5P0 310 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 TCRBV5S2A0A599 114 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 IFITM5A6NNB3 132 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 SEMA4FO95754 770 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 TCTAP57738 103 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 ZNF273Q14593 569 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 ZNF77Q15935 545 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 SLC35E4Q6ICL7 350 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 MUC20Q8N307 709 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-216ENST00000545170 OR51F2Q8NH61 342 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 ERGIC1Q969X5 290 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 ATOH8Q96SQ7 321 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 MBD1Q9UIS9 605 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-216ENST00000545170 CBLCQ9ULV8 474 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 DNPH1O43598 174 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 ZNF253O75346 499 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 P04436 131 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 CRHP06850 196 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 PTHLHP12272 177 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 ZNF140P52738 457 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-216ENST00000545170 KCNJ10P78508 379 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 PAX5Q02548 391 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 ZNF124Q15973 351 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 B3GNTL1Q67FW5 361 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-216ENST00000545170 ZNF776Q68DI1 518 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-216ENST00000545170 FUNDC1Q8IVP5 155 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 EIF4E3Q8N5X7 224 aaKnown RBP7.87□□□□□ -1.15
ATXN3-216ENST00000545170 PRR14Q9BWN1 585 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 ADGRB1O14514 1584 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 SEMG1P04279 462 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 LIMS3P0CW19 117 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 LIMS4P0CW20 117 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 SPINT3P49223 89 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 PCBD1P61457 104 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 SCGB1D4Q6XE38 83 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 SLC38A9Q8NBW4 561 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 SMG9Q9H0W8 520 aaKnown RBP7.87□□□□□ -1.15
ATXN3-216ENST00000545170 YIPF1Q9Y548 306 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 A0A0U1RQS6 177 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 GCGP01275 180 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 BPIFB3P59826 476 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 LGALSLQ3ZCW2 172 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-216ENST00000545170 PXDNQ92626 1479 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 ZAR1LA6NP61 321 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 NDUFB6O95139 128 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 BMP5P22003 454 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 POLR2GP62487 172 aaKnown RBP eCLIP7.87□□□□□ -1.15
ATXN3-216ENST00000545170 RPL11P62913 178 aaKnown RBP7.87□□□□□ -1.15
ATXN3-216ENST00000545170 CSNK1G2P78368 415 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 LMAN2Q12907 356 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 ASTLQ6HA08 431 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-216ENST00000545170 GPRIN1Q7Z2K8 1008 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 DEFB119Q8N690 84 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 OR4S1Q8NGB4 309 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 TEAD3Q99594 435 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 TREX1Q9NSU2 369 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 LIPGQ9Y5X9 500 aa7.87□□□□□ -1.15
ATXN3-216ENST00000545170 CCDC88AQ3V6T2 1871 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 CRXO43186 299 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-216ENST00000545170 DUSP11O75319 330 aaKnown RBP7.86□□□□□ -1.15
ATXN3-216ENST00000545170 CDS2O95674 445 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 GLRA1P23415 457 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 PNRC1Q12796 327 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-216ENST00000545170 FKBP1CQ5VVH2 108 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 RBM45Q8IUH3 476 aaKnown RBP7.86□□□□□ -1.15
ATXN3-216ENST00000545170 KREMEN2Q8NCW0 462 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 FZD6O60353 706 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 COX7A2P2O60397 106 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 TCN2P20062 427 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 TNFSF4P23510 183 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 SUB1P53999 127 aaKnown RBP eCLIP7.86□□□□□ -1.15
ATXN3-216ENST00000545170 ZNF880Q6PDB4 577 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 TFAP2EQ6VUC0 442 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 OLIG1Q8TAK6 271 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 RAB37Q96AX2 223 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 TOE1Q96GM8 510 aaKnown RBP7.86□□□□□ -1.15
ATXN3-216ENST00000545170 ARHGAP9Q9BRR9 750 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 RNF39Q9H2S5 420 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 SOWAHBA6NEL2 793 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 GPR12P47775 334 aa7.86□□□□□ -1.15
ATXN3-216ENST00000545170 TRA2BP62995 288 aaKnown RBP7.86□□□□□ -1.15
ATXN3-216ENST00000545170 SHHQ15465 462 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms