RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 MRPS11P82912 194 aaKnown RBP6.29□□□□□ -1.4
CPSF7-224ENST00000544990 ECH1Q13011 328 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 TMEM249Q2WGJ8 235 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 ZNF362Q5T0B9 420 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-224ENST00000544990 SPATA46Q5T0L3 261 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 HIST2H3PS2Q5TEC6 136 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 C1orf146Q5VVC0 180 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 OTPQ5XKR4 325 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 CYB5R2Q6BCY4 276 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 SLC27A4Q6P1M0 643 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 RFPL4BQ6ZWI9 263 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 HIST2H3AQ71DI3 136 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 CYB561A3Q8NBI2 242 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 SLC37A3Q8NCC5 494 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 OR8D4Q8NGM9 314 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 OR4Q3Q8NH05 313 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 DNAJC9Q8WXX5 260 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 PTP4A1Q93096 173 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 APOBEC3DQ96AK3 386 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-224ENST00000544990 NRBF2Q96F24 287 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 DIRC2Q96SL1 478 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 DDOQ99489 341 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 PITX2Q99697 317 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 COQ7Q99807 217 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 BPESC1Q9GZL8 116 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 CHODLQ9H9P2 273 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 YAE1D1Q9NRH1 226 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 ARMC1Q9NVT9 282 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 LHFPL6Q9Y693 200 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 VPS13CQ709C8 3753 aa6.29□□□□□ -1.4
CPSF7-224ENST00000544990 ABCA1O95477 2261 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 A0A096LNT2 108 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 A8MV72 311 aaPredicted RBP6.28□□□□□ -1.4
CPSF7-224ENST00000544990 TIMM8AO60220 97 aaPredicted RBP6.28□□□□□ -1.4
CPSF7-224ENST00000544990 TIPRLO75663 272 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 HMGN1P05114 100 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 FCGR1AP12314 374 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 OSMP13725 252 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 ZNF23P17027 643 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 PAICSP22234 425 aaKnown RBP6.28□□□□□ -1.4
CPSF7-224ENST00000544990 PRKACGP22612 351 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 COL8A2P25067 703 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 FASP25445 335 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 PYCR1P32322 319 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 GRK5P34947 590 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 GGT2P36268 569 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 MPV17P39210 176 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 MAGEB1P43366 347 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 GPR6P46095 362 aaPredicted RBP6.28□□□□□ -1.4
CPSF7-224ENST00000544990 GZMKP49863 264 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 ERFP50548 548 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 CHN2P52757 468 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 SLC25A1P53007 311 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 CCL8P80075 99 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 PSG7Q13046 419 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 RIN1Q13671 783 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 CRMP1Q14194 572 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 SLC18B1Q6NT16 456 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 SHQ1Q6PI26 577 aaKnown RBP6.28□□□□□ -1.4
CPSF7-224ENST00000544990 CORO6Q6QEF8 472 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 CCDC121Q6ZUS5 278 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 TMEM179BQ7Z7N9 219 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 LINC00346Q8IVM7 164 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 ATG16L2Q8NAA4 619 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 OR51L1Q8NGJ5 315 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 OR9Q1Q8NGQ5 310 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 OR5K1Q8NHB7 308 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 SLC7A6Q92536 515 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 SPTSSAQ969W0 71 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 SLCO4A1Q96BD0 722 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 OTULINQ96BN8 352 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 CMBLQ96DG6 245 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 PLEKHA8Q96JA3 519 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 ATF6BQ99941 703 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 RBM4Q9BWF3 364 aaKnown RBP6.28□□□□□ -1.4
CPSF7-224ENST00000544990 EGLN1Q9GZT9 426 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 CMC2Q9NRP2 79 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 MRPL22Q9NWU5 206 aaKnown RBP6.28□□□□□ -1.4
CPSF7-224ENST00000544990 KIF17Q9P2E2 1029 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 CYB5R1Q9UHQ9 305 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 ZDHHC8Q9ULC8 765 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 STARD10Q9Y365 291 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 AP4S1Q9Y587 144 aa6.28□□□□□ -1.4
CPSF7-224ENST00000544990 HIVEP2P31629 2446 aa6.27□□□□□ -1.41
CPSF7-224ENST00000544990 IGHV4-61A0A0C4DH41 118 aa6.27□□□□□ -1.41
CPSF7-224ENST00000544990 IGHV1-69-2A0A0G2JMI3 117 aa6.27□□□□□ -1.41
CPSF7-224ENST00000544990 TVP23AA6NH52 213 aa6.27□□□□□ -1.41
CPSF7-224ENST00000544990 INAFM1C9JVW0 142 aa6.27□□□□□ -1.41
CPSF7-224ENST00000544990 PRR23D1E9PI22 279 aaPredicted RBP6.27□□□□□ -1.41
CPSF7-224ENST00000544990 F5H5K5 113 aa6.27□□□□□ -1.41
CPSF7-224ENST00000544990 LYNX1G3V0Z9 82 aa6.27□□□□□ -1.41
CPSF7-224ENST00000544990 ZNF593O00488 134 aaPredicted RBP6.27□□□□□ -1.41
CPSF7-224ENST00000544990 PPIHO43447 177 aaKnown RBP6.27□□□□□ -1.41
CPSF7-224ENST00000544990 SPRY3O43610 288 aa6.27□□□□□ -1.41
CPSF7-224ENST00000544990 GYPBP06028 91 aa6.27□□□□□ -1.41
CPSF7-224ENST00000544990 ADH4P08319 380 aa6.27□□□□□ -1.41
CPSF7-224ENST00000544990 TACSTD2P09758 323 aa6.27□□□□□ -1.41
CPSF7-224ENST00000544990 PRR23D2P0DMB1 279 aaPredicted RBP6.27□□□□□ -1.41
CPSF7-224ENST00000544990 LYNX1P0DP58 116 aa6.27□□□□□ -1.41
CPSF7-224ENST00000544990 SELEP16581 610 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms