RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 SRP9P49458 86 aaKnown RBP11.12□□□□□ -0.63
CIT-214ENST00000544588 PRKXP51817 358 aa11.12□□□□□ -0.63
CIT-214ENST00000544588 LCN2P80188 198 aa11.12□□□□□ -0.63
CIT-214ENST00000544588 FLOT2Q14254 428 aa11.12□□□□□ -0.63
CIT-214ENST00000544588 ZNF362Q5T0B9 420 aaPredicted RBP11.12□□□□□ -0.63
CIT-214ENST00000544588 PGAP1Q75T13 922 aa11.12□□□□□ -0.63
CIT-214ENST00000544588 MRPL21Q7Z2W9 205 aaKnown RBP11.12□□□□□ -0.63
CIT-214ENST00000544588 DCXRQ7Z4W1 244 aa11.12□□□□□ -0.63
CIT-214ENST00000544588 KLHL36Q8N4N3 616 aa11.12□□□□□ -0.63
CIT-214ENST00000544588 ZNF283Q8N7M2 679 aa11.12□□□□□ -0.63
CIT-214ENST00000544588 ZNF799Q96GE5 643 aa11.12□□□□□ -0.63
CIT-214ENST00000544588 OR51V1Q9H2C8 321 aa11.12□□□□□ -0.63
CIT-214ENST00000544588 YY1AP1Q9H869 796 aa11.12□□□□□ -0.63
CIT-214ENST00000544588 ZNF556Q9HAH1 456 aa11.12□□□□□ -0.63
CIT-214ENST00000544588 PNRC2Q9NPJ4 139 aaKnown RBP11.12□□□□□ -0.63
CIT-214ENST00000544588 A0A0G2JMP0 313 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 A0A0X1KG70 313 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 GGT3PA6NGU5 568 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 FAM183AA6NL82 134 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 IQCF6A8MYZ5 107 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 TCF21O43680 179 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 DEAF1O75398 565 aaPredicted RBP11.11□□□□□ -0.63
CIT-214ENST00000544588 PNPP00491 289 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 HLA-DPB1P04440 258 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 SPI1P17947 270 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 THBS2P35442 1172 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 ENTPD1P49961 510 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 SLC25A1P53007 311 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 RAD23AP54725 363 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 GK3PQ14409 553 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 GK2Q14410 553 aaPredicted RBP11.11□□□□□ -0.63
CIT-214ENST00000544588 DCAF12L2Q5VW00 463 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 SPICQ8N5J4 248 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 OR4M2Q8NGB6 313 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 ZNF420Q8TAQ5 688 aaPredicted RBP11.11□□□□□ -0.63
CIT-214ENST00000544588 MEGF10Q96KG7 1140 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 RBM4Q9BWF3 364 aaKnown RBP11.11□□□□□ -0.63
CIT-214ENST00000544588 MED20Q9H944 212 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 COMMD3-BMI1R4GMX3 469 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 ATRQ13535 2644 aa11.11□□□□□ -0.63
CIT-214ENST00000544588 CHD3Q12873 2000 aaKnown RBP11.11□□□□□ -0.63
CIT-214ENST00000544588 LOC105371242A0A075B767 164 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 F5H5P2 479 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 RGS9O75916 674 aaPredicted RBP11.1□□□□□ -0.63
CIT-214ENST00000544588 DNAJC8O75937 253 aaPredicted RBP11.1□□□□□ -0.63
CIT-214ENST00000544588 CYB5R3P00387 301 aaPredicted RBP11.1□□□□□ -0.63
CIT-214ENST00000544588 IGHV2-70P01814 119 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 SLC2A1P11166 492 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 PAICSP22234 425 aaKnown RBP11.1□□□□□ -0.63
CIT-214ENST00000544588 PRKACGP22612 351 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 BLVRAP53004 296 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 BTG1P62324 171 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 CBX1P83916 185 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 EIF2B1Q14232 305 aaKnown RBP11.1□□□□□ -0.63
CIT-214ENST00000544588 GINS1Q14691 196 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 SNAI3Q3KNW1 292 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 KRTAP27-1Q3LI81 207 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 KRTAP24-1Q3LI83 254 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 COLCA1Q6ZS62 124 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 TMEM179BQ7Z7N9 219 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 MOGAT3Q86VF5 341 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 ERI1Q8IV48 349 aaKnown RBP11.1□□□□□ -0.63
CIT-214ENST00000544588 HS3ST5Q8IZT8 346 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 RFLNBQ8N5W9 214 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 OR10S1Q8NGN2 331 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 OR6N2Q8NGY6 317 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 SLAMF6Q96DU3 332 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 SLC30A2Q9BRI3 323 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 REPIN1Q9BWE0 567 aaKnown RBP11.1□□□□□ -0.63
CIT-214ENST00000544588 C7orf69Q9H7B7 122 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 GCM1Q9NP62 436 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 CMC2Q9NRP2 79 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 FAM53CQ9NYF3 392 aa11.1□□□□□ -0.63
CIT-214ENST00000544588 LRRC30A6NM36 301 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 TMEM178BH3BS89 294 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 MLNRO43193 412 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 TBX1O43435 398 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 FKBP6O75344 327 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 FOXH1O75593 365 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 IRF2P14316 349 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 HSD11B1P28845 292 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 GSTT1P30711 240 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 GRK5P34947 590 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 SLC15A1P46059 708 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 MMP16P51512 607 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 SCGB2A2Q13296 93 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 ZMYND11Q15326 602 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 OR8G1Q15617 311 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 KLHL12Q53G59 568 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 DRAM2Q6UX65 266 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 CD300LDQ6UXZ3 194 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 LRRC28Q86X40 367 aaPredicted RBP11.09□□□□□ -0.63
CIT-214ENST00000544588 TEX29Q8N6K0 151 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 OR2AE1Q8NHA4 323 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 SLC7A6OSQ96CW6 309 aaPredicted RBP11.09□□□□□ -0.63
CIT-214ENST00000544588 INTS14Q96SY0 518 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 KCNJ15Q99712 375 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 C19orf24Q9BVV8 132 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 TEX12Q9BXU0 123 aa11.09□□□□□ -0.63
CIT-214ENST00000544588 NMNAT2Q9BZQ4 307 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms