RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 MBNL1Q9NR56 388 aaKnown RBP14.05□□□□□ -0.16
CHD4-210ENST00000544040 MICAL3Q7RTP6 2002 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 A0A1W2PNV4 684 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 CTXN2P0C2S0 81 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 ARRB2P32121 409 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 MRPS21P82921 87 aaKnown RBP14.04□□□□□ -0.16
CHD4-210ENST00000544040 WDR89Q96FK6 387 aaPredicted RBP14.04□□□□□ -0.16
CHD4-210ENST00000544040 EGLN1Q9GZT9 426 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 FBXO34Q9NWN3 711 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 YTHDF2Q9Y5A9 579 aaKnown RBP14.04□□□□□ -0.16
CHD4-210ENST00000544040 SDHAP31040 664 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 BPIFB3P59826 476 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 TCTE3Q8IZS6 198 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 MOB1AQ9H8S9 216 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 LIN7CQ9NUP9 197 aaKnown RBP14.04□□□□□ -0.16
CHD4-210ENST00000544040 A0A1B0GX78 115 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 SULT1A3P0DMM9 295 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 SULT1A4P0DMN0 295 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 ERHP84090 104 aaKnown RBP14.04□□□□□ -0.16
CHD4-210ENST00000544040 GUCA2AQ02747 115 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 DHRS7BQ6IAN0 325 aaPredicted RBP14.04□□□□□ -0.16
CHD4-210ENST00000544040 ZNF680Q8NEM1 530 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 UCN3Q969E3 161 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 TRIB1Q96RU8 372 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 TRAPPC1Q9Y5R8 145 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 TRAV34A0A0B4J273 112 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 TMEM189-UBE2V1I3L0A0 370 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 GPR31O00270 319 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 SELEP16581 610 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 COX5AP20674 150 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 HTRA3P83110 453 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 TOMM20LQ6UXN7 152 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 PPP1R1CQ8WVI7 109 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 SDF2Q99470 211 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 XKRY2A2RUG3 117 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 TLCD2A6NGC4 264 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 CORO2AQ92828 525 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 S1PR3Q99500 378 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 CACNA1FO60840 1977 aa14.04□□□□□ -0.16
CHD4-210ENST00000544040 SPRY1O43609 319 aaPredicted RBP14.03□□□□□ -0.16
CHD4-210ENST00000544040 TMEM230Q96A57 120 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 FBXO4Q9UKT5 387 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 XRN1Q8IZH2 1706 aaKnown RBP14.03□□□□□ -0.16
CHD4-210ENST00000544040 ICOSLGO75144 302 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 SNCGO76070 127 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 CST5P28325 142 aaPredicted RBP14.03□□□□□ -0.16
CHD4-210ENST00000544040 FCRL6Q6DN72 434 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 BAP18Q8IXM2 172 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 C2orf50Q96LR7 162 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 TIMM10BQ9Y5J6 103 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 TNFSF11O14788 317 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 STAC2Q6ZMT1 411 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 LYG2Q86SG7 212 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 ACY3Q96HD9 319 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 PBOV1Q9GZY1 135 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 PRO1933Q9H354 126 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 MRPS2Q9Y399 296 aaKnown RBP14.03□□□□□ -0.16
CHD4-210ENST00000544040 KNDC1Q76NI1 1749 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 M0R135 149 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 HOXC11O43248 304 aaPredicted RBP14.03□□□□□ -0.16
CHD4-210ENST00000544040 RNASEKQ6P5S7 137 aaKnown RBP14.03□□□□□ -0.16
CHD4-210ENST00000544040 OR2AK2Q8NG84 335 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 WFDC5Q8TCV5 224 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 ZNF799Q96GE5 643 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 HDAC8Q9BY41 377 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 TOLLIPQ9H0E2 274 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 MED29Q9NX70 200 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 NDRG4Q9ULP0 352 aaKnown RBP14.03□□□□□ -0.16
CHD4-210ENST00000544040 S100A8P05109 93 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 FOXB2Q5VYV0 432 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 VWA1Q6PCB0 445 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 ZADH2Q8N4Q0 377 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 MS4A6EQ96DS6 147 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 COMMD5Q9GZQ3 224 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 RHOFQ9HBH0 211 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 KLK11Q9UBX7 282 aa14.03□□□□□ -0.16
CHD4-210ENST00000544040 A0A1W2PR48 441 aa14.02□□□□□ -0.16
CHD4-210ENST00000544040 ONECUT2O95948 504 aa14.02□□□□□ -0.16
CHD4-210ENST00000544040 ACSM4P0C7M7 580 aa14.02□□□□□ -0.16
CHD4-210ENST00000544040 HOXC8P31273 242 aa14.02□□□□□ -0.16
CHD4-210ENST00000544040 RPL18Q07020 188 aaKnown RBP14.02□□□□□ -0.16
CHD4-210ENST00000544040 SLC25A35Q3KQZ1 300 aa14.02□□□□□ -0.16
CHD4-210ENST00000544040 RNF212Q495C1 297 aa14.02□□□□□ -0.16
CHD4-210ENST00000544040 CMC2Q9NRP2 79 aa14.02□□□□□ -0.16
CHD4-210ENST00000544040 HAAOP46952 286 aa14.02□□□□□ -0.16
CHD4-210ENST00000544040 MZB1Q8WU39 189 aa14.02□□□□□ -0.16
CHD4-210ENST00000544040 C8orf44Q96CB5 159 aa14.02□□□□□ -0.16
CHD4-210ENST00000544040 EMDP50402 254 aa14.02□□□□□ -0.17
CHD4-210ENST00000544040 TMEM267Q0VDI3 215 aaPredicted RBP14.02□□□□□ -0.17
CHD4-210ENST00000544040 ETFDHQ16134 617 aa14.02□□□□□ -0.17
CHD4-210ENST00000544040 C17orf99Q6UX52 265 aa14.02□□□□□ -0.17
CHD4-210ENST00000544040 KLHDC1Q8N7A1 406 aa14.02□□□□□ -0.17
CHD4-210ENST00000544040 CRYGNQ8WXF5 182 aa14.02□□□□□ -0.17
CHD4-210ENST00000544040 TIMD4Q96H15 378 aa14.02□□□□□ -0.17
CHD4-210ENST00000544040 ESRP2Q9H6T0 727 aaKnown RBP14.02□□□□□ -0.17
CHD4-210ENST00000544040 ADGRL4Q9HBW9 690 aa14.02□□□□□ -0.17
CHD4-210ENST00000544040 HEXAP06865 529 aa14.02□□□□□ -0.17
CHD4-210ENST00000544040 SMIM17P0DL12 118 aa14.02□□□□□ -0.17
CHD4-210ENST00000544040 MGMTP16455 207 aa14.02□□□□□ -0.17
CHD4-210ENST00000544040 PCK2Q16822 640 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms