RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	DCTD	P32321	178 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	GLRX	P35754	106 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	CHN2	P52757	468 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	PSMA6	P60900	246 aa	Known RBP	8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	SLC35A2	P78381	396 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	TIGD6	Q17RP2	521 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	KRTAP27-1	Q3LI81	207 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZNF672	Q499Z4	452 aa	Predicted RBP	8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	BCL2L15	Q5TBC7	163 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	OR2G6	Q5TZ20	316 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	RFPL4B	Q6ZWI9	263 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	COMMD2	Q86X83	199 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZNF295-AS1	Q8N0V1	137 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	SYS1	Q8N2H4	156 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	NUP37	Q8NFH4	326 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	OR52H1	Q8NGJ2	320 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	SLC25A40	Q8TBP6	338 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	GATAD2B	Q8WXI9	593 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	TMEM204	Q9BSN7	226 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	JAM3	Q9BX67	310 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	C1QTNF5	Q9BXJ0	243 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	PBOV1	Q9GZY1	135 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	CA10	Q9NS85	328 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	DUSP13	Q9UII6	198 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	CAB39	Q9Y376	341 aa	Predicted RBP	8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	CMAHP	Q9Y471	501 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	ICE1	Q9Y2F5	2266 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	DOPEY2	Q9Y3R5	2298 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	COL12A1	Q99715	3063 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	ACOD1	A6NK06	481 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	OR4A8	P0C604	315 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	APOBEC3A	P31941	199 aa	Predicted RBP	8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	OTX1	P32242	354 aa	Predicted RBP	8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	SERPINF1	P36955	418 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	GABARAPL2	P60520	117 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	ERVS71-1	P61550	626 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	NKX6-1	P78426	367 aa	Predicted RBP	8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	MFGE8	Q08431	387 aa	Predicted RBP	8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	ODF4	Q2M2E3	257 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	SNAI3	Q3KNW1	292 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZNF718	Q3SXZ3	478 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZNF684	Q5T5D7	378 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	PRSS48	Q7RTY5	328 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	MRPL21	Q7Z2W9	205 aa	Known RBP	8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	KLB	Q86Z14	1044 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	C1orf174	Q8IYL3	243 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	FBXL14	Q8N1E6	418 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	SYNPR	Q8TBG9	265 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	FBXW5	Q969U6	566 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	CMBL	Q96DG6	245 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	C14orf79	Q96F83	325 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	SIGLEC11	Q96RL6	698 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	DHRS9	Q9BPW9	319 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	MND1	Q9BWT6	205 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	CDCA4	Q9BXL8	241 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	OR2J1	Q9GZK6	312 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	FAIM	Q9NVQ4	179 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	BABAM2	Q9NXR7	383 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	OR52A1	Q9UKL2	312 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	ADGRG4	Q8IZF6	3080 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545	PRR14L	Q5THK1	2151 aa		8.75	□□□□□ -1.01
CPSF7-221	ENST00000543545		A0A1W2PPW3	197 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	FAM221A	A4D161	298 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	GGT3P	A6NGU5	568 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545		J3QW42	95 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	HS3ST1	O14792	307 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	TNFAIP8	O95379	198 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	PNP	P00491	289 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	TUBG1	P23258	451 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	MAP2K4	P45985	399 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	MMP16	P51512	607 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	CDH15	P55291	814 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	MRPL28	Q13084	256 aa	Known RBP	8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	HLX	Q14774	488 aa	Predicted RBP	8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	MED22	Q15528	200 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	GLYATL3	Q5SZD4	288 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	RNLS	Q5VYX0	342 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	COLCA1	Q6ZS62	124 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	PGAP1	Q75T13	922 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	EGFL6	Q8IUX8	553 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	SVOP	Q8N4V2	548 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	NANOGP1	Q8N7R0	232 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	OR8B12	Q8NGG6	310 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	OR52N1	Q8NH53	320 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	OR2AE1	Q8NHA4	323 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	LILRB1	Q8NHL6	650 aa	Predicted RBP	8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	KLF14	Q8TD94	323 aa	Predicted RBP	8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	HAVCR2	Q8TDQ0	301 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	TMEM171	Q8WVE6	324 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	RORB	Q92753	470 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	PPP1R14A	Q96A00	147 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	SGK3	Q96BR1	496 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	PELI1	Q96FA3	418 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	MARS2	Q96GW9	593 aa	Known RBP	8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	REEP6	Q96HR9	211 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	SYT3	Q9BQG1	590 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZNF649	Q9BS31	505 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	POFUT1	Q9H488	388 aa		8.74	□□□□□ -1.01
CPSF7-221	ENST00000543545	PLK3	Q9H4B4	646 aa		8.74	□□□□□ -1.01

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms