RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ABCB10Q9NRK6 738 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 NUFIP1Q9UHK0 495 aaKnown RBP8.2□□□□□ -1.1
GNE-206ENST00000543356 DHDHQ9UQ10 334 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 CEP250Q9BV73 2442 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 LOC107986453A0A1B0GWG9 222 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 SLC22A20A6NK97 555 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 CENPXA8MT69 81 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 RPL36A-HNRNPH2H7BZ11 118 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 BPNT1O95861 308 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 EPXP11678 715 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 TALDO1P37837 337 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 MAGEB1P43366 347 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 SOX2P48431 317 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 ODF4Q2M2E3 257 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 ZNF181Q2M3W8 571 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 CEACAM16Q2WEN9 425 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 SLC25A35Q3KQZ1 300 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 ADGRE4PQ86SQ3 457 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 LRRTM1Q86UE6 522 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 MCEMP1Q8IX19 187 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 OR4M1Q8NGD0 313 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 GFI1Q99684 422 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 KCNJ15Q99712 375 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 FOXB1Q99853 325 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 CCDC32Q9BV29 185 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 PBOV1Q9GZY1 135 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 SLC25A18Q9H1K4 315 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 TCF7L1Q9HCS4 588 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 ABRACLQ9P1F3 81 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 COMMD3Q9UBI1 195 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 HHLA2Q9UM44 414 aa8.2□□□□□ -1.1
GNE-206ENST00000543356 CNOT1A5YKK6 2376 aaKnown RBP8.2□□□□□ -1.1
GNE-206ENST00000543356 TTLL8A6PVC2 850 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 HPGDSO60760 199 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 UPK1BO75841 260 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 FSTP19883 344 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 EIF2S3P41091 472 aaKnown RBP8.19□□□□□ -1.1
GNE-206ENST00000543356 ELFN2Q5R3F8 820 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 TSPO2Q5TGU0 170 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 RPUSD3Q6P087 351 aaKnown RBP8.19□□□□□ -1.1
GNE-206ENST00000543356 TMEM65Q6PI78 240 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 METAP1DQ6UB28 335 aaPredicted RBP8.19□□□□□ -1.1
GNE-206ENST00000543356 STAC2Q6ZMT1 411 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 SYT9Q86SS6 491 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 ASB5Q8WWX0 329 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 PPP1R14AQ96A00 147 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 FBXO17Q96EF6 278 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 CALHM2Q9HA72 323 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 AK6Q9Y3D8 172 aaKnown RBP8.19□□□□□ -1.1
GNE-206ENST00000543356 SSX4O60224 188 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 TTRP02766 147 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 CD2P06729 351 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 ZNF250P15622 560 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 ATF1P18846 271 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 PTBP1P26599 531 aaKnown RBP eCLIP8.19□□□□□ -1.1
GNE-206ENST00000543356 CFPP27918 469 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 CX3CR1P49238 355 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 SCRN3Q0VDG4 424 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 RAB35Q15286 201 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 STEAP3Q658P3 488 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 PLXDC2Q6UX71 529 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 ZNF627Q7L945 461 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 LRRC18Q8N456 261 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 SLC22A24Q8N4F4 322 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 POC5Q8NA72 575 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 APH1AQ96BI3 265 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 ORAI1Q96D31 301 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 DIRAS2Q96HU8 199 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 SEC22CQ9BRL7 303 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 MRI1Q9BV20 369 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 HDHD2Q9H0R4 259 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 GLRX2Q9NS18 164 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 CLCF1Q9UBD9 225 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 EIF3KQ9UBQ5 218 aaKnown RBP8.19□□□□□ -1.1
GNE-206ENST00000543356 FOXJ3Q9UPW0 622 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 ALPK2Q86TB3 2170 aa8.19□□□□□ -1.1
GNE-206ENST00000543356 A6NJY4 79 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 ZNF98A6NK75 572 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 ZNF587BE7ETH6 402 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 MKRN2OSH3BPM6 223 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 AIPO00170 330 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 NDUFS6O75380 124 aaKnown RBP8.18□□□□□ -1.1
GNE-206ENST00000543356 KRT33AO76009 404 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 TGM6O95932 706 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 APOC1P02654 83 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 PDGFAP04085 211 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 ACSM4P0C7M7 580 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 B4GALT1P15291 398 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 AGTR1P30556 359 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 OTX1P32242 354 aaPredicted RBP8.18□□□□□ -1.1
GNE-206ENST00000543356 ZNF121P58317 390 aaPredicted RBP8.18□□□□□ -1.1
GNE-206ENST00000543356 BPIFB3P59826 476 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 PCBD1P61457 104 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 ZNF79Q15937 498 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 LRRC28Q86X40 367 aaPredicted RBP8.18□□□□□ -1.1
GNE-206ENST00000543356 OR13C3Q8NGS6 347 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 TRMT10AQ8TBZ6 339 aaKnown RBP8.18□□□□□ -1.1
GNE-206ENST00000543356 SARAFQ96BY9 339 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 CMTM3Q96MX0 182 aa8.18□□□□□ -1.1
GNE-206ENST00000543356 TAAR6Q96RI8 345 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms