RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 TNNT2P45379 298 aaPredicted RBP1.12□□□□□ -2.23
KNTC1-213ENST00000542727 CRISP1P54107 249 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 SYNJ2BPP57105 145 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 SELENBP1Q13228 472 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 IL15RAQ13261 267 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 ART3Q13508 389 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 CHRNA6Q15825 494 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 XKR7Q5GH72 579 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 SPIN3Q5JUX0 258 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 PRAMEF20Q5VT98 475 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 UBE2UQ5VVX9 321 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 NPSR1Q6W5P4 371 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 MBOAT2Q6ZWT7 520 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 IQCKQ8N0W5 287 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 C11orf72Q8NBR9 251 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 TMEM104Q8NE00 496 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 OR5T1Q8NG75 326 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 OR7G2Q8NG99 324 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 OR6Q1Q8NGQ2 317 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 ELMO1Q92556 727 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 WDR34Q96EX3 536 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 DYNLL2Q96FJ2 89 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 TPD52L3Q96J77 140 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 MARVELD1Q9BSK0 173 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 SHANK2-AS3Q9BTD1 123 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 TMEM243Q9BU79 118 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 SLIRPQ9GZT3 109 aaKnown RBP1.12□□□□□ -2.23
KNTC1-213ENST00000542727 MRM3Q9HC36 420 aaKnown RBP1.12□□□□□ -2.23
KNTC1-213ENST00000542727 AK9Q5TCS8 1911 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 ADGRL1O94910 1474 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 TRAV6A0A075B6T7 132 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 IGHV1-69DA0A0B4J2H0 117 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 IGHV7-4-1A0A0J9YVY3 117 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 XKRY2A2RUG3 117 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 NCBP2LA6PVI3 153 aaKnown RBP1.11□□□□□ -2.23
KNTC1-213ENST00000542727 CEACAM18A8MTB9 384 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 AP3B1O00203 1094 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 MANBAO00462 879 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 SLC9A3R1O14745 358 aaPredicted RBP1.11□□□□□ -2.23
KNTC1-213ENST00000542727 RAD51CO43502 376 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 NMT2O60551 498 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 WBP4O75554 376 aaKnown RBP1.11□□□□□ -2.23
KNTC1-213ENST00000542727 SERPINB7O75635 380 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 GLSO94925 669 aaPredicted RBP1.11□□□□□ -2.23
KNTC1-213ENST00000542727 PAHP00439 452 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 FTH1P02794 183 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 MYL2P10916 166 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 TCP1P17987 556 aaKnown RBP1.11□□□□□ -2.23
KNTC1-213ENST00000542727 POLR2IP36954 125 aaKnown RBP1.11□□□□□ -2.23
KNTC1-213ENST00000542727 TNFSF9P41273 254 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 PRLHRP49683 370 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 RAB9AP51151 201 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 GFERP55789 205 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 CCNA1P78396 465 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 TRAM2Q15035 370 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 ALKBH6Q3KRA9 238 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 TPTE2P1Q5T6R2 138 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 TTC23LQ6PF05 361 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 MDP1Q86V88 176 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 ZNF547Q8IVP9 402 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 ST20-AS1Q8NBB2 130 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 OR5M1Q8NGP8 315 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 OR1J4Q8NGS1 313 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 C17orf50Q8WW18 174 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 ZNF606Q8WXB4 792 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 RNF145Q96MT1 663 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 IP6K3Q96PC2 410 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 RHOXF2Q9BQY4 288 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 C20orf24Q9BUV8 137 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 NEUROG2Q9H2A3 272 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 LHX5Q9H2C1 402 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 MED4Q9NPJ6 270 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 ZNF230Q9UIE0 474 aaPredicted RBP1.11□□□□□ -2.23
KNTC1-213ENST00000542727 ZNF229Q9UJW7 825 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 FARSAQ9Y285 508 aaKnown RBP1.11□□□□□ -2.23
KNTC1-213ENST00000542727 SLC17A4Q9Y2C5 497 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 UBIAD1Q9Y5Z9 338 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 MYO16Q9Y6X6 1858 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 PCDH11XQ9BZA7 1347 aa1.11□□□□□ -2.23
KNTC1-213ENST00000542727 SYNJ2BP-COX16A0A087WUM0 186 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 IGHV3-49A0A0A0MS15 119 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 IGHV3-72A0A0B4J1Y9 119 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 C9JVG2 144 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 NDUFAB1O14561 156 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 CHMP2AO43633 222 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 PLIN3O60664 434 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 HUS1O60921 280 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 CCNB2O95067 398 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 LSM8O95777 96 aaKnown RBP1.1□□□□□ -2.23
KNTC1-213ENST00000542727 IGHV3-11P01762 117 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 RPN2P04844 631 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 PTMSP20962 102 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 BCKDHBP21953 392 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 PSMB5P28074 263 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 NDUFA8P51970 172 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 RAB10P61026 200 aa1.1□□□□□ -2.23
KNTC1-213ENST00000542727 RPS11P62280 158 aaKnown RBP eCLIP1.1□□□□□ -2.23
KNTC1-213ENST00000542727 PRR3P79522 188 aaKnown RBP1.1□□□□□ -2.23
KNTC1-213ENST00000542727 FLI1Q01543 452 aaPredicted RBP1.1□□□□□ -2.23
KNTC1-213ENST00000542727 MEF2BQ02080 365 aaPredicted RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms