RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 CADP27708 2225 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 TMEM269A0A1B0GVZ9 245 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 ACOD1A6NK06 481 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 GPRIN2O60269 458 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 CDK1P06493 297 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 ANXA2P07355 339 aaKnown RBP14.74□□□□□ -0.05
LIG1-204ENST00000542460 ADRA2AP08913 450 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 SLC2A1P11166 492 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 C21orf33P30042 268 aaPredicted RBP14.74□□□□□ -0.05
LIG1-204ENST00000542460 APOBEC3AP31941 199 aaPredicted RBP14.74□□□□□ -0.05
LIG1-204ENST00000542460 ETV1P50549 477 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 MMP16P51512 607 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 OR12D2P58182 307 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 ZNF121P58317 390 aaPredicted RBP14.74□□□□□ -0.05
LIG1-204ENST00000542460 PSMA6P60900 246 aaKnown RBP14.74□□□□□ -0.05
LIG1-204ENST00000542460 PPP1CBP62140 327 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 MVKQ03426 396 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 ZNF829Q3KNS6 432 aaPredicted RBP14.74□□□□□ -0.05
LIG1-204ENST00000542460 TP53I3Q53FA7 332 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 LIPNQ5VXI9 398 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 RGS7BPQ6MZT1 257 aaPredicted RBP14.74□□□□□ -0.05
LIG1-204ENST00000542460 SYS1Q8N2H4 156 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 YTHDF1Q9BYJ9 559 aaKnown RBP14.74□□□□□ -0.05
LIG1-204ENST00000542460 CMAHPQ9Y471 501 aa14.74□□□□□ -0.05
LIG1-204ENST00000542460 J3QLW9 94 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 ZNF19P17023 458 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 FABP6P51161 128 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 ERVS71-1P61550 626 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 MALLQ13021 153 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 TMPRSS11AQ6ZMR5 421 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 PRSS45Q7RTY3 260 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 ZNF611Q8N823 705 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 OR52H1Q8NGJ2 320 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 SLC25A40Q8TBP6 338 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 C4orf36Q96KX1 117 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 UBTD1Q9HAC8 227 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 BRD7Q9NPI1 651 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 FAIMQ9NVQ4 179 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 PAK1IP1Q9NWT1 392 aaPredicted RBP14.73□□□□□ -0.05
LIG1-204ENST00000542460 CAB39Q9Y376 341 aaPredicted RBP14.73□□□□□ -0.05
LIG1-204ENST00000542460 N6AMT1Q9Y5N5 214 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 DCHS2Q6V1P9 2916 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 NOTCH2Q04721 2471 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 ITPR2Q14571 2701 aa14.73□□□□□ -0.05
LIG1-204ENST00000542460 RPP14O95059 124 aaKnown RBP14.72□□□□□ -0.05
LIG1-204ENST00000542460 OR4A8P0C604 315 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 PRF1P14222 555 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 TTKP33981 857 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 SERPINF1P36955 418 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 ADIPOQQ15848 244 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 SNAI3Q3KNW1 292 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 ZNF718Q3SXZ3 478 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 RNLSQ5VYX0 342 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 FAM57BQ71RH2 274 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 KLHL36Q8N4N3 616 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 MARS2Q96GW9 593 aaKnown RBP14.72□□□□□ -0.05
LIG1-204ENST00000542460 CDCA4Q9BXL8 241 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 OR2J1Q9GZK6 312 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 ISG20L2Q9H9L3 353 aaKnown RBP14.72□□□□□ -0.05
LIG1-204ENST00000542460 ACOXLQ9NUZ1 547 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 FAM206AQ9NX38 181 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 CLEC2DQ9UHP7 191 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 R4GMQ9 66 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 ABCA4P78363 2273 aa14.72□□□□□ -0.05
LIG1-204ENST00000542460 H3BSA7 217 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 TBX1O43435 398 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 RGS10O43665 173 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 SRSF10O75494 262 aaKnown RBP14.71□□□□□ -0.05
LIG1-204ENST00000542460 ATE1O95260 518 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 PNPP00491 289 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 ZNF250P15622 560 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 EEF1B2P24534 225 aaKnown RBP14.71□□□□□ -0.05
LIG1-204ENST00000542460 GCH1P30793 250 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 SPATA46Q5T0L3 261 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 FBXL14Q8N1E6 418 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 SYNPRQ8TBG9 265 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 KLF14Q8TD94 323 aaPredicted RBP14.71□□□□□ -0.05
LIG1-204ENST00000542460 RORBQ92753 470 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 MRPL24Q96A35 216 aaKnown RBP14.71□□□□□ -0.05
LIG1-204ENST00000542460 PGAM5Q96HS1 289 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 SIGLEC11Q96RL6 698 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 OR10A2Q9H208 303 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 MOB1AQ9H8S9 216 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 ERVK-18Q9QC07 812 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 ERGIC3Q9Y282 383 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 LRCH1Q9Y2L9 728 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 SNX5Q9Y5X3 404 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 HEATR1Q9H583 2144 aaKnown RBP14.71□□□□□ -0.05
LIG1-204ENST00000542460 RTTNQ86VV8 2226 aa14.71□□□□□ -0.05
LIG1-204ENST00000542460 LOC110117498-PIK3R3F6TDL0 507 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 XRCC2O43543 280 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 MT-ND5P03915 603 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 DANCRP0C864 163 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 SELENOVP59797 346 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 MFGE8Q08431 387 aaPredicted RBP14.71□□□□□ -0.06
LIG1-204ENST00000542460 MRPL28Q13084 256 aaKnown RBP14.71□□□□□ -0.06
LIG1-204ENST00000542460 MBNL2Q5VZF2 373 aaKnown RBP14.71□□□□□ -0.06
LIG1-204ENST00000542460 FBXW12Q6X9E4 464 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 C20orf204Q6ZNR8 217 aa14.71□□□□□ -0.06
LIG1-204ENST00000542460 PRSS48Q7RTY5 328 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms