RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 ZNF280BQ86YH2 543 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 SLC39A11Q8N1S5 342 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 OR2C3Q8N628 320 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 TCTEX1D1Q8N7M0 179 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 ARIH2OSQ8N7S6 290 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 ACOT4Q8N9L9 421 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 SUMF2Q8NBJ7 301 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 CHST4Q8NCG5 386 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 OR4K17Q8NGC6 315 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 RHEBL1Q8TAI7 183 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 SLC2A12Q8TD20 617 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 SFXN5Q8TD22 340 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 CLEC4DQ8WXI8 215 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 PSMF1Q92530 271 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 KTI12Q96EK9 354 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 TVP23CQ96ET8 276 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 THOC3Q96J01 351 aaKnown RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 LRRC3BQ96PB8 259 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 SIGLEC12Q96PQ1 595 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 CHRDL1Q9BU40 450 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 RAB11FIP5Q9BXF6 653 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 DUSP16Q9BY84 665 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 P2RY12Q9H244 342 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 WDR54Q9H977 334 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 AMBNQ9NP70 447 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 SLC2A4RGQ9NR83 387 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 ZNF586Q9NXT0 402 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 MRPL15Q9P015 296 aaKnown RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 ABI3Q9P2A4 366 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 CLN8Q9UBY8 286 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 RNF150Q9ULK6 438 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 POLR3KQ9Y2Y1 108 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 FIS1Q9Y3D6 152 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 WIPI2Q9Y4P8 454 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 TJP1Q07157 1748 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 DDX60LQ5H9U9 1706 aaKnown RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 COL5A2P05997 1499 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 BCORQ6W2J9 1755 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 SHANK3Q9BYB0 1731 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 TRAV14DV4A0A0A6YYC5 116 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 TRAV1-2A0A0B4J238 106 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 LOC100289279A0A1B0GTE1 492 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 A0A1B0GTI1 187 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 FAM95CA0A1B0GW59 222 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 A0A1W2PRS3 328 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 GAGE12BA1L429 117 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 TLCD2A6NGC4 264 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 HIDE1A8MVS5 230 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 CLDN34H7C241 214 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 DCTN6O00399 190 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 XKRYO14609 159 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 GABRDO14764 452 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 JTBO76095 146 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 ZNF205O95201 554 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 TXNDC12O95881 172 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 IL2RAP01589 272 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 IGHA2P01877 340 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 GAPDHP04406 335 aaKnown RBP4.67□□□□□ -1.66
SNHG1-218ENST00000541615 WNT1P04628 370 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 HLA-DQB2P05538 268 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 C1QTNF9P0C862 333 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 PGA3P0DJD8 388 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 OSMP13725 252 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 GLB1P16278 677 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 KITLGP21583 273 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 RPS4Y1P22090 263 aaKnown RBP4.67□□□□□ -1.66
SNHG1-218ENST00000541615 GDF1P27539 372 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 KDELR2P33947 212 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 MDH2P40926 338 aaKnown RBP4.67□□□□□ -1.66
SNHG1-218ENST00000541615 SLC6A11P48066 632 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 NPBWR2P48146 333 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 CX3CR1P49238 355 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 HNRNPA3P51991 378 aaKnown RBP4.67□□□□□ -1.66
SNHG1-218ENST00000541615 SCAND1P57086 179 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 FAM3BP58499 235 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-218ENST00000541615 MTPNP58546 118 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 PLP1P60201 277 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 S100A10P60903 97 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 UFM1P61960 85 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 RPS15P62841 145 aaKnown RBP4.67□□□□□ -1.66
SNHG1-218ENST00000541615 HERV-K104P63124 156 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 SRSF3P84103 164 aaKnown RBP4.67□□□□□ -1.66
SNHG1-218ENST00000541615 GAGE5Q13069 117 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 GAGE6Q13070 117 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 TAF13Q15543 124 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 RAB30Q15771 203 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 MEP1BQ16820 701 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 UPP1Q16831 310 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 IAH1Q2TAA2 248 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-218ENST00000541615 GAB4Q2WGN9 574 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 CEACAM21Q3KPI0 293 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 LRRC10Q5BKY1 277 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 PDZD11Q5EBL8 140 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 CCDC144NLQ6NUI1 221 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 ZNF585AQ6P3V2 769 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 SFXN4Q6P4A7 337 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 PODNL1Q6PEZ8 512 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 LHFPL2Q6ZUX7 228 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 ACOT1Q86TX2 421 aa4.67□□□□□ -1.66
SNHG1-218ENST00000541615 APOBEC3FQ8IUX4 373 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms