RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 ABHD12BQ7Z5M8 362 aaPredicted RBP24.24■■□□□ 1.47
CCM2-218ENST00000541586 SYT9Q86SS6 491 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 OR6Q1Q8NGQ2 317 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 FGFBP3Q8TAT2 258 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 KCNS3Q9BQ31 491 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 C6orf62Q9GZU0 229 aaPredicted RBP24.24■■□□□ 1.47
CCM2-218ENST00000541586 SGCEO43556 437 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 DOK2O60496 412 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 NCR1O76036 304 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 SOX2P48431 317 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 PCBD1P61457 104 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 GALK2Q01415 458 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 SCRN3Q0VDG4 424 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 HSD17B12Q53GQ0 312 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 ZNF474Q6S9Z5 364 aaPredicted RBP24.24■■□□□ 1.47
CCM2-218ENST00000541586 KCNJ15Q99712 375 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 PBOV1Q9GZY1 135 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 KCNJ16Q9NPI9 418 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 UBR5O95071 2799 aaPredicted RBP24.23■■□□□ 1.47
CCM2-218ENST00000541586 FLNCQ14315 2725 aa24.23■■□□□ 1.47
CCM2-218ENST00000541586 TRAV1-2A0A0B4J238 106 aa24.23■■□□□ 1.47
CCM2-218ENST00000541586 CLDN14O95500 239 aa24.23■■□□□ 1.47
CCM2-218ENST00000541586 MAPK3P27361 379 aaPredicted RBP24.23■■□□□ 1.47
CCM2-218ENST00000541586 CX3CR1P49238 355 aa24.23■■□□□ 1.47
CCM2-218ENST00000541586 BMXP51813 675 aa24.23■■□□□ 1.47
CCM2-218ENST00000541586 RAB35Q15286 201 aa24.23■■□□□ 1.47
CCM2-218ENST00000541586 SLC25A35Q3KQZ1 300 aa24.23■■□□□ 1.47
CCM2-218ENST00000541586 LINC00299Q6ZSB3 139 aa24.23■■□□□ 1.47
CCM2-218ENST00000541586 ORAI1Q96D31 301 aa24.23■■□□□ 1.47
CCM2-218ENST00000541586 PLEKHB1Q9UF11 243 aaPredicted RBP24.23■■□□□ 1.47
CCM2-218ENST00000541586 TIMM10BQ9Y5J6 103 aa24.23■■□□□ 1.47
CCM2-218ENST00000541586 A0A096LPE4 126 aa24.22■■□□□ 1.47
CCM2-218ENST00000541586 A0A1W2PPZ6 126 aa24.22■■□□□ 1.47
CCM2-218ENST00000541586 ISG15P05161 165 aa24.22■■□□□ 1.47
CCM2-218ENST00000541586 ZNF121P58317 390 aaPredicted RBP24.22■■□□□ 1.47
CCM2-218ENST00000541586 MOGQ16653 247 aa24.22■■□□□ 1.47
CCM2-218ENST00000541586 RSPO1Q2MKA7 263 aaPredicted RBP24.22■■□□□ 1.47
CCM2-218ENST00000541586 ZNF774Q6NX45 483 aa24.22■■□□□ 1.47
CCM2-218ENST00000541586 ZNF704Q6ZNC4 412 aaPredicted RBP24.22■■□□□ 1.47
CCM2-218ENST00000541586 BEND4Q6ZU67 534 aa24.22■■□□□ 1.47
CCM2-218ENST00000541586 TPRA1Q86W33 373 aa24.22■■□□□ 1.47
CCM2-218ENST00000541586 NR2C2APQ86WQ0 139 aa24.22■■□□□ 1.47
CCM2-218ENST00000541586 ELMOD2Q8IZ81 293 aa24.22■■□□□ 1.47
CCM2-218ENST00000541586 ZNF283Q8N7M2 679 aa24.22■■□□□ 1.47
CCM2-218ENST00000541586 HDHD2Q9H0R4 259 aa24.22■■□□□ 1.47
CCM2-218ENST00000541586 MOB1AQ9H8S9 216 aa24.22■■□□□ 1.47
CCM2-218ENST00000541586 NUFIP1Q9UHK0 495 aaKnown RBP24.22■■□□□ 1.47
CCM2-218ENST00000541586 A0A075B6Q4 140 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 SYNGR3O43761 229 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 TTRP02766 147 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 AGAP20933 346 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 MPGP29372 298 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 PSG4Q00888 419 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 TSEN15Q8WW01 171 aaKnown RBP24.21■■□□□ 1.47
CCM2-218ENST00000541586 WACQ9BTA9 647 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 OR2H1Q9GZK4 316 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 ZNF224Q9NZL3 707 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 JKAMPQ9P055 326 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 TRBV5-7A0A0A0MS05 114 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 MMP7P09237 267 aaPredicted RBP24.21■■□□□ 1.47
CCM2-218ENST00000541586 INHBBP09529 407 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 UBCP0CG48 685 aaKnown RBP24.21■■□□□ 1.47
CCM2-218ENST00000541586 SLC2A1P11166 492 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 SRMP19623 302 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 OTX1P32242 354 aaPredicted RBP24.21■■□□□ 1.47
CCM2-218ENST00000541586 SSC4DQ8WTU2 575 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 SLC7A6Q92536 515 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 TMEM106AQ96A25 262 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 WNT5BQ9H1J7 359 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 SLC24A3Q9HC58 644 aa24.21■■□□□ 1.47
CCM2-218ENST00000541586 LOC107986453A0A1B0GWG9 222 aa24.2■■□□□ 1.46
CCM2-218ENST00000541586 WIPF3A6NGB9 483 aa24.2■■□□□ 1.46
CCM2-218ENST00000541586 F5H5K5 113 aa24.2■■□□□ 1.46
CCM2-218ENST00000541586 ITGA5P08648 1049 aa24.2■■□□□ 1.46
CCM2-218ENST00000541586 TMEM244Q5VVB8 128 aa24.2■■□□□ 1.46
CCM2-218ENST00000541586 Q6ZT83 130 aa24.2■■□□□ 1.46
CCM2-218ENST00000541586 AKR7LQ8NHP1 331 aa24.2■■□□□ 1.46
CCM2-218ENST00000541586 N6AMT1Q9Y5N5 214 aa24.2■■□□□ 1.46
CCM2-218ENST00000541586 COL12A1Q99715 3063 aa24.2■■□□□ 1.46
CCM2-218ENST00000541586 IQCMA0A1B0GVH7 501 aa24.19■■□□□ 1.46
CCM2-218ENST00000541586 P2RY10O00398 339 aa24.19■■□□□ 1.46
CCM2-218ENST00000541586 ACSM4P0C7M7 580 aa24.19■■□□□ 1.46
CCM2-218ENST00000541586 ACHEP22303 614 aa24.19■■□□□ 1.46
CCM2-218ENST00000541586 ASCL1P50553 236 aa24.19■■□□□ 1.46
CCM2-218ENST00000541586 FAM27E3Q08E93 113 aa24.19■■□□□ 1.46
CCM2-218ENST00000541586 PRSS45Q7RTY3 260 aa24.19■■□□□ 1.46
CCM2-218ENST00000541586 OR1F12Q8NHA8 337 aa24.19■■□□□ 1.46
CCM2-218ENST00000541586 HHLA2Q9UM44 414 aa24.19■■□□□ 1.46
CCM2-218ENST00000541586 OR6C6A6NF89 314 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 RAF1P04049 648 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 DBHP09172 617 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 CRYGSP22914 178 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 ANOS1P23352 680 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 OR10A3P58181 314 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 ECH1Q13011 328 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 TSC22D1Q15714 1073 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 SLC36A2Q495M3 483 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 NAA40Q86UY6 237 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 THRSPQ92748 146 aa24.18■■□□□ 1.46
CCM2-218ENST00000541586 SPTSSAQ969W0 71 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms