RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 SIRT4Q9Y6E7 314 aaPredicted RBP7.59□□□□□ -1.19
YBX3-211ENST00000541351 A0A0B4J2E0 115 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.58□□□□□ -1.2
YBX3-211ENST00000541351 A0A1B0GX12 115 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 A6NDX4 124 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 NKX6-3A6NJ46 265 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 A6NLC8 198 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 GMDSO60547 372 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 TRMUO75648 421 aaKnown RBP7.58□□□□□ -1.2
YBX3-211ENST00000541351 SLC2A10O95528 541 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 HLA-DPB1P04440 258 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 FRMD6-AS1P0C7T7 363 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 PRKAR1BP31321 381 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 GGT2P36268 569 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 CCT5P48643 541 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 BLCAPP62952 87 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 PRB3Q04118 309 aaPredicted RBP7.58□□□□□ -1.2
YBX3-211ENST00000541351 EMX2Q04743 252 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 NPTX1Q15818 432 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 TMEM95Q3KNT9 176 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 PRAMEF6Q5VXH4 476 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 ETV3LQ6ZN32 361 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 ZNF621Q6ZSS3 439 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 ARMC8Q8IUR7 673 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 PIFOQ8TCI5 191 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 SPRYD4Q8WW59 207 aaPredicted RBP7.58□□□□□ -1.2
YBX3-211ENST00000541351 LINC00476Q8WZB0 136 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 MYCBPQ99417 103 aaPredicted RBP7.58□□□□□ -1.2
YBX3-211ENST00000541351 P2RX4Q99571 388 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 TM2D3Q9BRN9 247 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 ALG12Q9BV10 488 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 DNTTIP1Q9H147 329 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 NINJ2Q9NZG7 142 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 PTTG3PQ9NZH4 202 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 SAR1BQ9Y6B6 198 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 CAPN7Q9Y6W3 813 aa7.58□□□□□ -1.2
YBX3-211ENST00000541351 A0A087WUV0 522 aaPredicted RBP7.57□□□□□ -1.2
YBX3-211ENST00000541351 OR6C6A6NF89 314 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 SEC14L6B5MCN3 397 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 C5orf58C9J3I9 102 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 LRRN3E7EW58 273 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 BLOC1S5-TXNDC5H3BN57 136 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 LY6G6CO95867 125 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 CH25HO95992 272 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 CPA3P15088 417 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 S100A3P33764 101 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 ERFP50548 548 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 DYNLT3P51808 116 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 LUMP51884 338 aaPredicted RBP7.57□□□□□ -1.2
YBX3-211ENST00000541351 GTF2A1P52655 376 aaPredicted RBP7.57□□□□□ -1.2
YBX3-211ENST00000541351 RGS8P57771 180 aaPredicted RBP7.57□□□□□ -1.2
YBX3-211ENST00000541351 DSTNP60981 165 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 RPL23AP62750 156 aaKnown RBP7.57□□□□□ -1.2
YBX3-211ENST00000541351 SLC7A5Q01650 507 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 MALLQ13021 153 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 MPPED2Q15777 294 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 ZNF74Q16587 644 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 PLBD1Q6P4A8 553 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 TTC33Q6PID6 262 aaPredicted RBP7.57□□□□□ -1.2
YBX3-211ENST00000541351 CPLX4Q7Z7G2 160 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 TMEM219Q86XT9 240 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 KRT73Q86Y46 540 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 OSR2Q8N2R0 312 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 OR9Q1Q8NGQ5 310 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 BBS10Q8TAM1 723 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 SLC38A5Q8WUX1 472 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 C17orf50Q8WW18 174 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 ASB10Q8WXI3 467 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 MALSU1Q96EH3 234 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 MED30Q96HR3 178 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 ZIM3Q96PE6 472 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 SPATA25Q9BR10 227 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 KCNK9Q9NPC2 374 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 C14orf119Q9NWQ9 140 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 TBL2Q9Y4P3 447 aaKnown RBP7.57□□□□□ -1.2
YBX3-211ENST00000541351 UGT2A1Q9Y4X1 527 aa7.57□□□□□ -1.2
YBX3-211ENST00000541351 A0A1W2PPL8 197 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 NPIPB13A6NJU9 1138 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 NPIPB4C9JG80 1138 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 PTBP3O95758 552 aaKnown RBP7.56□□□□□ -1.2
YBX3-211ENST00000541351 MED14OSP0DP75 135 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 ETS2P15036 469 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 HTR2AP28223 471 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 NAA10P41227 235 aaPredicted RBP7.56□□□□□ -1.2
YBX3-211ENST00000541351 IKZF1Q13422 519 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 OR1Q1Q15612 314 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 OVCH2Q7RTZ1 564 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 C10orf107Q8IVU9 208 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 DUS3LQ96G46 650 aaKnown RBP7.56□□□□□ -1.2
YBX3-211ENST00000541351 TMEM19Q96HH6 336 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 CCL13Q99616 98 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 BCL2L10Q9HD36 194 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 INIPQ9NRY2 104 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 ZNF446Q9NWS9 450 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 C1orf123Q9NWV4 160 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 GIMAP2Q9UG22 337 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 KCNG2Q9UJ96 466 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 LYVE1Q9Y5Y7 322 aa7.56□□□□□ -1.2
YBX3-211ENST00000541351 HUWE1Q7Z6Z7 4374 aaKnown RBP7.55□□□□□ -1.2
YBX3-211ENST00000541351 PSMB11A5LHX3 300 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms