RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 H3BNX3 289 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 H7C1C5 153 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 FXYD1O00168 92 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 P2RY10O00398 339 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 ENSAO43768 121 aaKnown RBP6.05□□□□□ -1.44
YBX3-209ENST00000540747 AHCYL1O43865 530 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 PTBP3O95758 552 aaKnown RBP6.05□□□□□ -1.44
YBX3-209ENST00000540747 SFTPBP07988 381 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 DBHP09172 617 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 CTLA4P16410 223 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 SRP9P49458 86 aaKnown RBP6.05□□□□□ -1.44
YBX3-209ENST00000540747 TAS2R41P59536 307 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 CTXN1P60606 82 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 RAP1BP61224 184 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 LCN6P62502 163 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 RAP1AP62834 184 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 HIST1H3AP68431 136 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 AQP6Q13520 282 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 TRIM25Q14258 630 aaKnown RBP6.05□□□□□ -1.44
YBX3-209ENST00000540747 RSPO1Q2MKA7 263 aaPredicted RBP6.05□□□□□ -1.44
YBX3-209ENST00000540747 CCDC92Q53HC0 331 aaPredicted RBP6.05□□□□□ -1.44
YBX3-209ENST00000540747 MESTQ5EB52 335 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 SAMD4BQ5PRF9 694 aaKnown RBP6.05□□□□□ -1.44
YBX3-209ENST00000540747 INTS11Q5TA45 600 aaKnown RBP6.05□□□□□ -1.44
YBX3-209ENST00000540747 HIST2H3PS2Q5TEC6 136 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 GPR157Q5UAW9 335 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 OR2T2Q6IF00 324 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 HACD2Q6Y1H2 254 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 Q6ZPA2 131 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 DCDC5Q6ZRR9 648 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 COLCA1Q6ZS62 124 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 Q6ZSV7 163 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 HIST2H3AQ71DI3 136 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 FAM122BQ7Z309 247 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 IGFN1Q86VF2 1251 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 MOGAT3Q86VF5 341 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 ZSCAN4Q8NAM6 433 aaPredicted RBP6.05□□□□□ -1.44
YBX3-209ENST00000540747 OR8B3Q8NGG8 313 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 OR13G1Q8NGZ3 307 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 OR10A6Q8NH74 314 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 TSPEARQ8WU66 669 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 RASSF5Q8WWW0 418 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 ZDHHC16Q969W1 377 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 BPIFA2Q96DR5 249 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 OR8B2Q96RD0 313 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 TRIM15Q9C019 465 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 SIRPDQ9H106 197 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 C16orf95Q9H693 158 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 GID8Q9NWU2 228 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 ASH2LQ9UBL3 628 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 CTSZQ9UBR2 303 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 CLN8Q9UBY8 286 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 RAB26Q9ULW5 256 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 A4GNTQ9UNA3 340 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 MED31Q9Y3C7 131 aa6.05□□□□□ -1.44
YBX3-209ENST00000540747 TRAV27A0A087WT01 109 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 IGHV1-69DA0A0B4J2H0 117 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 TEX13CA0A0J9YWL9 993 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 PRSS37A4D1T9 235 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 C5orf63A6NC05 138 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 BBIP1A8MTZ0 92 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 F5H5P2 479 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 FBP2O00757 339 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 DENRO43583 198 aaKnown RBP6.04□□□□□ -1.44
YBX3-209ENST00000540747 IGHV1-69P01742 117 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 IGHV4-59P01825 116 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 CRYBA1P05813 215 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 PEX2P28328 305 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 MSX2P35548 267 aaPredicted RBP6.04□□□□□ -1.44
YBX3-209ENST00000540747 CD200P41217 278 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 IER3P46695 156 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 RGS6P49758 472 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 AQP4P55087 323 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 LSM6P62312 80 aaKnown RBP6.04□□□□□ -1.44
YBX3-209ENST00000540747 HOXA4Q00056 320 aaPredicted RBP6.04□□□□□ -1.44
YBX3-209ENST00000540747 MS4A2Q01362 244 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 MAB21L1Q13394 359 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 KCNMB1Q16558 191 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 ANKDD1AQ495B1 522 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 SAMD5Q5TGI4 173 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 NLRC3Q7RTR2 1065 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 C1orf87Q8N0U7 546 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 OR5AS1Q8N127 324 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 GALNT4Q8N4A0 578 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 RNF148Q8N7C7 305 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 CELF2-AS1Q8N7Q2 184 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 ATG16L2Q8NAA4 619 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 OR1F12Q8NHA8 337 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 UBE2FQ969M7 185 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 RASD2Q96D21 266 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 PRRC1Q96M27 445 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 HOPXQ9BPY8 73 aaPredicted RBP6.04□□□□□ -1.44
YBX3-209ENST00000540747 SMURF1Q9HCE7 757 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 VCX3AQ9NNX9 186 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 TNFRSF19Q9NS68 423 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 PTTG3PQ9NZH4 202 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 BAG5Q9UL15 447 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 SH3GLB1Q9Y371 365 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 ADAM18Q9Y3Q7 739 aa6.04□□□□□ -1.44
YBX3-209ENST00000540747 AP4S1Q9Y587 144 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms