RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 MRPS17Q9Y2R5 130 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 CTAG2O75638 210 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 DFFBO76075 338 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 GYPBP06028 91 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF735P0CB33 412 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 GABRG2P18507 467 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 ADRA2CP18825 462 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 TBPP20226 339 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 EFNB2P52799 333 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 IL13RA1P78552 427 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 C4orf17Q53FE4 359 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 MED27Q6P2C8 311 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 ANKRD16Q6P6B7 361 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF836Q6ZNA1 936 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 MBOAT2Q6ZWT7 520 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC25A42Q86VD7 318 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 TMPRSS12Q86WS5 348 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 VRK2Q86Y07 508 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 UBALD2Q8IYN6 164 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 NKAIN3Q8N8D7 197 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF615Q8N8J6 731 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 BHLHE23Q8NDY6 225 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 OR14C36Q8NHC7 312 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 GNRHR2Q96P88 292 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 URM1Q9BTM9 101 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 C1QTNF2Q9BXJ5 285 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC35B3Q9H1N7 401 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 OR2AG1Q9H205 316 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 SUSD2Q9UGT4 822 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 NTNG1Q9Y2I2 539 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 IGLON5A6NGN9 336 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 BHLHE40O14503 412 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 IL2RAP01589 272 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 OR4A8P0C604 315 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 FUT1P19526 365 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 MC3RP41968 323 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 FXYD6P3P58550 94 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 ACTBP60709 375 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 ACTG1P63261 375 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 TLE4Q04727 773 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 DECR1Q16698 335 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 TMEM52BQ4KMG9 183 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 TEX38Q6PEX7 206 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 ULK3Q6PHR2 472 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 C17orf64Q86WR6 236 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 NXPE1Q8N323 547 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 ARL14Q8N4G2 192 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 COMMD1Q8N668 190 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 CXorf40AQ8TE69 158 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 GPX8Q8TED1 209 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 TMEM255BQ8WV15 326 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 OR5P2Q8WZ92 322 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 SNX22Q96L94 193 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 AQP10Q96PS8 301 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 CDC6Q99741 560 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 NELFAQ9H3P2 528 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 FBRSQ9HAH7 460 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 PLEKHA2Q9HB19 425 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 OR5AC2Q9NZP5 309 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 MYOTQ9UBF9 498 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 TRPC4Q9UBN4 977 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 GNG8Q9UK08 70 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 SH2B3Q9UQQ2 575 aa8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 GPR55Q9Y2T6 319 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 PCYT1BQ9Y5K3 369 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-243ENST00000540387 A0A0G2JN53 185 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 LNP1A1A4G5 178 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 NME2P1O60361 137 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF432O94892 652 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 AIFM1O95831 613 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 GCGP01275 180 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 PCCBP05166 539 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 PGA3P0DJD8 388 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 BTG2P78543 158 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 LYPLAL1Q5VWZ2 237 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 BTNL3Q6UXE8 466 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 SYT13Q7L8C5 426 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC16A14Q7RTX9 510 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 SZRD1Q7Z422 152 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 DCXRQ7Z4W1 244 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC35G3Q8N808 338 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 TMEM229BQ8NBD8 167 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 CYB561A3Q8NBI2 242 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 GPR87Q9BY21 358 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 NMES1Q9C002 83 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 CHST11Q9NPF2 352 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 SIRT3Q9NTG7 399 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 WSB2Q9NYS7 404 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 PITPNC1Q9UKF7 332 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 PADI1Q9ULC6 663 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 COLEC10Q9Y6Z7 277 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 YLPM1P49750 1951 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 FAM171A2A8MVW0 826 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 K7ESM1 405 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 TSPAN6O43657 245 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 GPRIN2O60269 458 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 CIDEAO60543 219 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF354AO60765 605 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 MTX2O75431 263 aa8.49□□□□□ -1.05
CTNNA1-243ENST00000540387 CSN2P05814 226 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms