RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 MLLT11Q13015 90 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 MRPL28Q13084 256 aaKnown RBP16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 TIGD6Q17RP2 521 aa16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 TBC1D28Q2M2D7 210 aa16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 C3orf36Q3SXR2 165 aa16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 ARMCX4Q5H9R4 360 aa16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 SP5Q6BEB4 398 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 FDX2Q6P4F2 183 aa16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 PRSS35Q8N3Z0 413 aa16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 OR2G2Q8NGZ5 317 aa16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 ISYNA1Q9NPH2 558 aa16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 G6PC2Q9NQR9 355 aa16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 FRRS1LQ9P0K9 344 aa16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 GTF2A1LQ9UNN4 478 aa16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 N6AMT1Q9Y5N5 214 aa16.38■□□□□ 0.21
TNFRSF1A-213ENST00000540022 ABCA12Q86UK0 2595 aa16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 PNMA8CA0A1B0GUJ8 204 aa16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 OGG1O15527 345 aa16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 APOC1P02654 83 aa16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 KIR3DL2P43630 455 aa16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 TAS2R43P59537 309 aa16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 ALKBH1Q13686 389 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 CDK5R1Q15078 307 aa16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 CCDC58Q4VC31 144 aa16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 WDR38Q5JTN6 314 aa16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 RPL22L1Q6P5R6 122 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 CATSPERDQ86XM0 798 aa16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 IL17RDQ8NFM7 739 aa16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 HAVCR2Q8TDQ0 301 aa16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 ZNF319Q9P2F9 582 aa16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 SLC22A13Q9Y226 551 aa16.37■□□□□ 0.21
TNFRSF1A-213ENST00000540022 DCHS2Q6V1P9 2916 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 ANXA2P07355 339 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 ZNF35P13682 527 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 CELP19835 753 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 CALCRP30988 508 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 WNT5AP41221 380 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 ALDH3B2P48448 385 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 NR1H2P55055 460 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 NAAAQ02083 359 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 DMKNQ6E0U4 476 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 COLCA1Q6ZS62 124 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 FAM57BQ71RH2 274 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 OR1J2Q8NGS2 313 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 RPS4Y2Q8TD47 263 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 C4orf45Q96LM5 186 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 DCLRE1CQ96SD1 692 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 CDH20Q9HBT6 801 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 OR52A1Q9UKL2 312 aa16.36■□□□□ 0.21
TNFRSF1A-213ENST00000540022 IGHV2OR16-5A0A0B4J2B6 119 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 LCATP04180 440 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 TPBGQ13641 420 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 TSTQ16762 297 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 SNAI3Q3KNW1 292 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 ARL9Q6T311 187 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 OR8B12Q8NGG6 310 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 TMIGD2Q96BF3 282 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 C1QTNF5Q9BXJ0 243 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 PBOV1Q9GZY1 135 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 NUFIP1Q9UHK0 495 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 APCP25054 2843 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 TRBV2A0A0J9YWF9 115 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 DPRXA6NFQ7 191 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 OR4C45A6NMZ5 311 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 NGFP01138 241 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 TTRP02766 147 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 IGFBP2P18065 325 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 CD40P25942 277 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 LIPAP38571 399 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 CCR9P51686 369 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 SSX1Q16384 188 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 LIPKQ5VXJ0 399 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 ELMOD2Q8IZ81 293 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 ZNF101Q8IZC7 436 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 SMIM19Q96E16 107 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 PGAM5Q96HS1 289 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 DACH2Q96NX9 599 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 MOB1AQ9H8S9 216 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 NGBQ9NPG2 151 aa16.35■□□□□ 0.21
TNFRSF1A-213ENST00000540022 ACOD1A6NK06 481 aa16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 PLPP2O43688 288 aa16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 ZFPL1O95159 310 aa16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 CPEP16870 476 aa16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 RPL5P46777 297 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 SLC3A1Q07837 685 aa16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 ODF4Q2M2E3 257 aa16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 BCL2L15Q5TBC7 163 aa16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 TMEM108Q6UXF1 575 aa16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 PHC2Q8IXK0 858 aa16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 UFD1Q92890 307 aa16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 PGLYRP3Q96LB9 341 aa16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 PDCD1LG2Q9BQ51 273 aa16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 OR51B6Q9H340 312 aa16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 LRBAP50851 2863 aa16.34■□□□□ 0.21
TNFRSF1A-213ENST00000540022 CREBBPQ92793 2442 aa16.33■□□□□ 0.21
TNFRSF1A-213ENST00000540022 TBX1O43435 398 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ICMTO60725 284 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 CRYAAP02489 173 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 FAM157BP0CG42 384 aa16.33■□□□□ 0.2
TNFRSF1A-213ENST00000540022 EPXP11678 715 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms