RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ZNF705GA8MUZ8 300 aaPredicted RBP8.99□□□□□ -0.97
TRAF1-202ENST00000540010 SYNGR4O95473 234 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 ZNF44P15621 663 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 RPA2P15927 270 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 MALLQ13021 153 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 LRRTM1Q86UE6 522 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 FAM71CQ8NEG0 241 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 DUSP18Q8NEJ0 188 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 MARCH1Q8TCQ1 289 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 MVB12AQ96EY5 273 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 ZNF845Q96IR2 970 aaPredicted RBP8.99□□□□□ -0.97
TRAF1-202ENST00000540010 PCDHGA5Q9Y5G8 931 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 SPTBN5Q9NRC6 3674 aaKnown RBP8.99□□□□□ -0.97
TRAF1-202ENST00000540010 CACNA1EQ15878 2313 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 PLPP2O43688 288 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 HPXP02790 462 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 MSL3P1P0C860 447 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 CSF2RBP32927 897 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 HLA-BQ31612 363 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 GUSBP11Q6P575 273 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 TMPPEQ6ZT21 453 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 C17orf82Q86X59 251 aaPredicted RBP8.99□□□□□ -0.97
TRAF1-202ENST00000540010 OR51E1Q8TCB6 317 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 SSX3Q99909 188 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 RAB33BQ9H082 229 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 FAM86C1Q9NVL1 165 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 ASH2LQ9UBL3 628 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 CNOT1A5YKK6 2376 aaKnown RBP8.99□□□□□ -0.97
TRAF1-202ENST00000540010 OR6C68A6NDL8 312 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 STMND1H3BQB6 276 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 H3BUI4 141 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 RD3LP0DJH9 198 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 NAGAP17050 411 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 EPHA8P29322 1005 aaPredicted RBP8.99□□□□□ -0.97
TRAF1-202ENST00000540010 AKR1C3P42330 323 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 DCAF7P61962 342 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 MFAP5Q13361 173 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 GSG1Q2KHT4 349 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 CLLU1Q5K131 121 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 NPSR1Q6W5P4 371 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 ACOT7LQ6ZUV0 252 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 SDSLQ96GA7 329 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 OR6C1Q96RD1 312 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 ZNF354AO60765 605 aaPredicted RBP8.99□□□□□ -0.97
TRAF1-202ENST00000540010 F10P00742 488 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 IGKV1D-16P01601 117 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 OR13C7P0DN81 318 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 GNB3P16520 340 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 CNR1P21554 472 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 CPT2P23786 658 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 PSMB6P28072 239 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 TAS2R46P59540 309 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 UBE2KP61086 200 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 MOB3CQ70IA8 216 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 PRSS42Q7Z5A4 293 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 YIPF5Q969M3 257 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 SRPK3Q9UPE1 567 aa8.99□□□□□ -0.97
TRAF1-202ENST00000540010 PTRH2Q9Y3E5 179 aaKnown RBP8.99□□□□□ -0.97
TRAF1-202ENST00000540010 SIGLEC6O43699 453 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 ZFAND5O76080 213 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 HRH1P35367 487 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 OPRM1P35372 400 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 MAP2K6P52564 334 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 OR2B8PP59922 312 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 GABREP78334 506 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 C17orf67Q0P5P2 114 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 DOC2BQ14184 412 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 EIF2S3LQ2VIR3 472 aaKnown RBP8.98□□□□□ -0.97
TRAF1-202ENST00000540010 PLCXD3Q63HM9 321 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 OR52W1Q6IF63 320 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 MRPL21Q7Z2W9 205 aaKnown RBP8.98□□□□□ -0.97
TRAF1-202ENST00000540010 D2HGDHQ8N465 521 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 CHAC2Q8WUX2 184 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 HAS2Q92819 552 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 EVA1AQ9H8M9 152 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 KLHL13Q9P2N7 655 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 WASF3Q9UPY6 502 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 AKAP6Q13023 2319 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 TRAV1-2A0A0B4J238 106 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 FAM221AA4D161 298 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 RGS13O14921 159 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 IFNA1P01562 189 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 GABRA4P48169 554 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 MECP2P51608 486 aaKnown RBP8.98□□□□□ -0.97
TRAF1-202ENST00000540010 EFNA3P52797 238 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 MRPS34P82930 218 aaKnown RBP8.98□□□□□ -0.97
TRAF1-202ENST00000540010 ELAVL1Q15717 326 aaKnown RBP8.98□□□□□ -0.97
TRAF1-202ENST00000540010 TMPRSS11FQ6ZWK6 438 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 DND1Q8IYX4 353 aaKnown RBP8.98□□□□□ -0.97
TRAF1-202ENST00000540010 OR2I1PQ8NGU4 316 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 C1orf123Q9NWV4 160 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 FBXO7Q9Y3I1 522 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 A0A1W2PNR3 127 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 TCRBV16S1A1N1A0A5B0 115 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 SNRPGP15A8MWD9 76 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 THY1P04216 161 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 CT45A8P0DMV1 189 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 CT45A9P0DMV2 189 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 SELENOPP49908 381 aa8.98□□□□□ -0.97
TRAF1-202ENST00000540010 FUT7Q11130 342 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms