RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 MTPNP58546 118 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 LSM6P62312 80 aaKnown RBP9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 LCN6P62502 163 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 SELPLGQ14242 412 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 MPPED2Q15777 294 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 ZSCAN26Q16670 478 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 ANKDD1AQ495B1 522 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 CDONQ4KMG0 1287 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 OXLD1Q5BKU9 147 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 CCDC80Q76M96 950 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 BTN2A1Q7KYR7 527 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 OR51A7Q8NH64 312 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 CFHR4Q92496 578 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 SGCDQ92629 289 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 ZNF583Q96ND8 569 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 CGREF1Q99674 301 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 ECSITQ9BQ95 431 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 EBF4Q9BQW3 602 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 CCDC28BQ9BUN5 200 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 HCAR1Q9BXC0 346 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 KAT8Q9H7Z6 458 aaKnown RBP9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 SMURF1Q9HCE7 757 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 TRIM36Q9NQ86 728 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 UFSP2Q9NUQ7 469 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 ZNRD1Q9P1U0 126 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 BAG5Q9UL15 447 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 NOTCH3Q9UM47 2321 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 TENM3Q9P273 2699 aa9.57□□□□□ -0.88
CLSTN3-209ENST00000539982 TEX13CA0A0J9YWL9 993 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 A0A1B0GVI7 797 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 RER1O15258 196 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 XPNPEP2O43895 674 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 CCDC22O60826 627 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 VSIG8P0DPA2 414 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 TNFRSF1BP20333 461 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 HOXA4Q00056 320 aaPredicted RBP9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 FHL1Q13642 323 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 OR8B8Q15620 311 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 VMACQ2NL98 169 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 PRAMEF6Q5VXH4 476 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 METTL21CQ5VZV1 264 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 C11orf88Q6PI97 169 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 METAP1DQ6UB28 335 aaPredicted RBP9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 COLCA1Q6ZS62 124 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 TRPM8Q7Z2W7 1104 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 VMO1Q7Z5L0 202 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 DHDDSQ86SQ9 333 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 DPP10Q8N608 796 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 BOLLQ8N9W6 283 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 SPERTQ8NA61 448 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 OR10A6Q8NH74 314 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 OR5R1Q8NH85 324 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 PPA2Q9H2U2 334 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 WDR76Q9H967 626 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 FN3KRPQ9HA64 309 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 AURKAIP1Q9NWT8 199 aaPredicted RBP9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 GRHPRQ9UBQ7 328 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 KPTNQ9Y664 436 aa9.56□□□□□ -0.88
CLSTN3-209ENST00000539982 TRAV27A0A087WT01 109 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 TRAV38-1A0A0B4J264 116 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 PRSS37A4D1T9 235 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 ERICH4A6NGS2 130 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 XKRYO14609 159 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 DVL1O14640 695 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 OR10H3O60404 316 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 FCN3O75636 299 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 CTLA4P16410 223 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 KIR2DS4P43632 304 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 GZMMP51124 257 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 EFNB2P52799 333 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 ST3GAL3Q11203 375 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 OTPQ5XKR4 325 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 OAFQ86UD1 273 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 GLB1L2Q8IW92 636 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 MICU2Q8IYU8 434 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 C11orf44Q8N8P7 122 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 PLPP7Q8NBV4 271 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 COQ7Q99807 217 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 SEMA6AQ9H2E6 1030 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 RPUSD1Q9UJJ7 312 aaKnown RBP9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 SIGLEC9Q9Y336 463 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 NDUFAF1Q9Y375 327 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 COL7A1Q02388 2944 aa9.55□□□□□ -0.88
CLSTN3-209ENST00000539982 OOEPA6NGQ2 149 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 SLC16A7O60669 478 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 KHDRBS3O75525 346 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 PTBP3O95758 552 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 GYPAP02724 150 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 EEF1B2P24534 225 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 RPL4P36578 427 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 OR1E2P47887 323 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 HIST1H3AP68431 136 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 GUCA2AQ02747 115 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 PRKCDQ05655 676 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 DBPQ10586 325 aaPredicted RBP9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 GK2Q14410 553 aaPredicted RBP9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 OR8G1Q15617 311 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 KCNMB1Q16558 191 aa9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 RSPO1Q2MKA7 263 aaPredicted RBP9.54□□□□□ -0.88
CLSTN3-209ENST00000539982 MESTQ5EB52 335 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms