RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SRSF4Q08170 494 aaKnown RBP12.65□□□□□ -0.38
USB1-203ENST00000539737 ZSCAN26Q16670 478 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 ZNF718Q3SXZ3 478 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 ACSM5Q6NUN0 579 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 USP51Q70EK9 711 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 VASH1Q7L8A9 365 aaPredicted RBP12.65□□□□□ -0.38
USB1-203ENST00000539737 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.65□□□□□ -0.38
USB1-203ENST00000539737 GJC3Q8NFK1 279 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 OR9Q1Q8NGQ5 310 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 OR1J1Q8NGS3 322 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 POM121L2Q96KW2 1035 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 PKP2Q99959 881 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 RBM4BQ9BQ04 359 aaKnown RBP12.65□□□□□ -0.38
USB1-203ENST00000539737 HDHD2Q9H0R4 259 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 WIPI2Q9Y4P8 454 aa12.65□□□□□ -0.38
USB1-203ENST00000539737 PLSCR5A0PG75 271 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 C17orf100A8MU93 164 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 PRR23D1E9PI22 279 aaPredicted RBP12.64□□□□□ -0.39
USB1-203ENST00000539737 ICMTO60725 284 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 GPANK1O95872 356 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 IGHV2-5P01817 119 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 PRR23D2P0DMB1 279 aaPredicted RBP12.64□□□□□ -0.39
USB1-203ENST00000539737 ANPEPP15144 967 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 FMO3P31513 532 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 SCGB2A2Q13296 93 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 MEP1BQ16820 701 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 MIDNQ504T8 468 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 DCAF12L2Q5VW00 463 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 USP43Q70EL4 1123 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 OR6K6Q8NGW6 343 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 OR2AJ1Q8NGZ0 328 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 IPCEF1Q8WWN9 437 aaPredicted RBP12.64□□□□□ -0.39
USB1-203ENST00000539737 ZNF747Q9BV97 191 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 CDADC1Q9BWV3 514 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 SUCNR1Q9BXA5 334 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 C7orf69Q9H7B7 122 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 ELOVL3Q9HB03 270 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 S100A14Q9HCY8 104 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 LHFPL6Q9Y693 200 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 COMMD3-BMI1R4GMX3 469 aa12.64□□□□□ -0.39
USB1-203ENST00000539737 WNK1Q9H4A3 2382 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 LOC100509620A0A075B734 347 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 IGHV3OR16-10A0A075B7F0 116 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 OR6C6A6NF89 314 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 MITFO75030 526 aaPredicted RBP12.63□□□□□ -0.39
USB1-203ENST00000539737 ABHD16AO95870 558 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 FSHBP01225 129 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 FAM209AQ5JX71 171 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 SPATA46Q5T0L3 261 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 OTPQ5XKR4 325 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 SLC18B1Q6NT16 456 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 OR51L1Q8NGJ5 315 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 OR1F12Q8NHA8 337 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 DVL3Q92997 716 aaPredicted RBP12.63□□□□□ -0.39
USB1-203ENST00000539737 OTULINQ96BN8 352 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 TIMD4Q96H15 378 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 ZNF48Q96MX3 618 aaPredicted RBP12.63□□□□□ -0.39
USB1-203ENST00000539737 DCLRE1CQ96SD1 692 aaKnown RBP12.63□□□□□ -0.39
USB1-203ENST00000539737 COQ7Q99807 217 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 CIB1Q99828 191 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 GABARAPL3Q9BY60 117 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 CYSLTR2Q9NS75 346 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 MRPL22Q9NWU5 206 aaKnown RBP12.63□□□□□ -0.39
USB1-203ENST00000539737 NKIRAS2Q9NYR9 191 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 UBAP1Q9NZ09 502 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 CYB5R1Q9UHQ9 305 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 ORC6Q9Y5N6 252 aa12.63□□□□□ -0.39
USB1-203ENST00000539737 IGLV3-9A0A075B6K5 115 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 IGHV1-69-2A0A0G2JMI3 117 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 A0A0G2JMP0 313 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 A0A0X1KG70 313 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 DNAJC9-AS1A6NH13 148 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 TVP23AA6NH52 213 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 FAM183AA6NL82 134 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 H3BSA7 217 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 J3QW42 95 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 RER1O15258 196 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 PRODHO43272 600 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 GYPBP06028 91 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 GGT2P36268 569 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 LIPAP38571 399 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 ENTPD1P49961 510 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 ZNF81P51508 661 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 SEC61A1P61619 476 aaKnown RBP12.62□□□□□ -0.39
USB1-203ENST00000539737 HIST1H3AP68431 136 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 ECH1Q13011 328 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 PTGES3Q15185 160 aaKnown RBP12.62□□□□□ -0.39
USB1-203ENST00000539737 SNAPC1Q16533 368 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 CCDC92Q53HC0 331 aaPredicted RBP12.62□□□□□ -0.39
USB1-203ENST00000539737 ZMAT1Q5H9K5 638 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 HIST2H3PS2Q5TEC6 136 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 SLX4IPQ5VYV7 408 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 PLBD1Q6P4A8 553 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 HIST2H3AQ71DI3 136 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 LINC00346Q8IVM7 164 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 PQLC1Q8N2U9 271 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 TEX29Q8N6K0 151 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 OR4M2Q8NGB6 313 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 ELMOD3Q96FG2 381 aa12.62□□□□□ -0.39
USB1-203ENST00000539737 COG8Q96MW5 612 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms