RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 DHDHQ9UQ10 334 aa11.21□□□□□ -0.61
SFSWAP-208ENST00000539506 LOC100289279A0A1B0GTE1 492 aa11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 PLPP3O14495 311 aa11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 XKRYO14609 159 aa11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 ZNF208O43345 1280 aa11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 WDPCPO95876 746 aa11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 GNB3P16520 340 aa11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 RAB13P51153 203 aa11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 PDZK1IP1Q13113 114 aa11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 C1orf140Q5VVS0 124 aa11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 MAMDC2Q7Z304 686 aaPredicted RBP11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 KCNRGQ8N5I3 272 aa11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 RXFP4Q8TDU9 374 aa11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 SLC41A2Q96JW4 573 aa11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 ZNF587Q96SQ5 575 aaPredicted RBP11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 GSKIPQ9P0R6 139 aa11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 EMC9Q9Y3B6 208 aa11.21□□□□□ -0.62
SFSWAP-208ENST00000539506 IGKV1D-43A0A0B4J1Z2 117 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 TRAV20A0A0B4J274 112 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 MSGN1A6NI15 193 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 LINC00587B1AMM8 73 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 BCL2L11O43521 198 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 PMS2P2O95744 297 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 ZNF806P0C7X5 589 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 GP1BBP13224 206 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 DAOP14920 347 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 FBLP22087 321 aaKnown RBP11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 HTR2CP28335 458 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 GNALP38405 381 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 RASGEF1BQ0VAM2 473 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 PMPCAQ10713 525 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 FAM166AQ6J272 317 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 FDX2Q6P4F2 183 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 ZNF679Q8IYX0 411 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 SLC25A45Q8N413 288 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 D2HGDHQ8N465 521 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 OR5M8Q8NGP6 311 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 RNF128Q8TEB7 428 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 GPX8Q8TED1 209 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 MAFIPQ8WZ33 124 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 RRNAD1Q96FB5 475 aaKnown RBP11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 C20orf24Q9BUV8 137 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 TXNIPQ9H3M7 391 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 VSX1Q9NZR4 365 aaPredicted RBP11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 TMEM14AQ9Y6G1 99 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 CABIN1Q9Y6J0 2220 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 PIAS2O75928 621 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 OPN1LWP04000 364 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 PGCP20142 388 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 HRH1P35367 487 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 TAS2R19P59542 299 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 B2MP61769 119 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 FMODQ06828 376 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 SWI5Q1ZZU3 235 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 HLA-DQA1Q5Y7H0 255 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 TMPRSS9Q7Z410 1059 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 OR4D6Q8NGJ1 314 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 CCDC107Q8WV48 283 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 ASB5Q8WWX0 329 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 ARL5BQ96KC2 179 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 MRI1Q9BV20 369 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 ABHD6Q9BV23 337 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 POTEKPQ9BYX7 375 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 FOXQ1Q9C009 403 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 CHRDQ9H2X0 955 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 TAS2R8Q9NYW2 309 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 COA3Q9Y2R0 106 aaPredicted RBP11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 COL5A1P20908 1838 aaPredicted RBP11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 A0A0D9SG52 128 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 SULT2B1O00204 365 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 TMEM127O75204 238 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 FBXO24O75426 580 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 GIMD1P0DJR0 217 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 SRFP11831 508 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 SERPINF1P36955 418 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 CD96P40200 585 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 MECP2P51608 486 aaKnown RBP11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 POLR2HP52434 150 aaKnown RBP11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 PNLIPRP2P54317 469 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 DCAF7P61962 342 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 HNRNPKP61978 463 aaKnown RBP eCLIP11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 NKAPLQ5M9Q1 402 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 TMEM225Q6GV28 225 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 TRAPPC6BQ86SZ2 158 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 FJX1Q86VR8 437 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 ZNF584Q8IVC4 421 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 LILRB2Q8N423 598 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 SLC38A9Q8NBW4 561 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 MARCH1Q8TCQ1 289 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 THAP3Q8WTV1 239 aaPredicted RBP11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 MVB12AQ96EY5 273 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 ZNF629Q9UEG4 869 aaPredicted RBP11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 LRP12Q9Y561 859 aa11.2□□□□□ -0.62
SFSWAP-208ENST00000539506 TNRC18O15417 2968 aaPredicted RBP11.19□□□□□ -0.62
SFSWAP-208ENST00000539506 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.19□□□□□ -0.62
SFSWAP-208ENST00000539506 WIPF3A6NGB9 483 aa11.19□□□□□ -0.62
SFSWAP-208ENST00000539506 FTCDNL1E5RQL4 147 aa11.19□□□□□ -0.62
SFSWAP-208ENST00000539506 SRSF10O75494 262 aaKnown RBP11.19□□□□□ -0.62
SFSWAP-208ENST00000539506 SERPINA5P05154 406 aa11.19□□□□□ -0.62
SFSWAP-208ENST00000539506 DNASE1L1P49184 302 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms