RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 C1orf146Q5VVC0 180 aa13.25□□□□□ -0.29
CIT-210ENST00000539413 TMEM236Q5W0B7 351 aa13.25□□□□□ -0.29
CIT-210ENST00000539413 PLBD1Q6P4A8 553 aa13.25□□□□□ -0.29
CIT-210ENST00000539413 SPATC1Q76KD6 591 aa13.25□□□□□ -0.29
CIT-210ENST00000539413 ERI1Q8IV48 349 aaKnown RBP13.25□□□□□ -0.29
CIT-210ENST00000539413 OR10AD1Q8NGE0 317 aa13.25□□□□□ -0.29
CIT-210ENST00000539413 OR6N2Q8NGY6 317 aa13.25□□□□□ -0.29
CIT-210ENST00000539413 RAB1CQ92928 201 aa13.25□□□□□ -0.29
CIT-210ENST00000539413 TIMD4Q96H15 378 aa13.25□□□□□ -0.29
CIT-210ENST00000539413 ZNF582Q96NG8 517 aaPredicted RBP13.25□□□□□ -0.29
CIT-210ENST00000539413 INTS14Q96SY0 518 aa13.25□□□□□ -0.29
CIT-210ENST00000539413 COPS4Q9BT78 406 aa13.25□□□□□ -0.29
CIT-210ENST00000539413 OR51V1Q9H2C8 321 aa13.25□□□□□ -0.29
CIT-210ENST00000539413 LPAR2Q9HBW0 351 aa13.25□□□□□ -0.29
CIT-210ENST00000539413 IL19Q9UHD0 177 aa13.25□□□□□ -0.29
CIT-210ENST00000539413 NAV3Q8IVL0 2385 aa13.25□□□□□ -0.29
CIT-210ENST00000539413 PRR23D1E9PI22 279 aaPredicted RBP13.24□□□□□ -0.29
CIT-210ENST00000539413 H0YL77 283 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 MLNRO43193 412 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 HMGN1P05114 100 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 PRR23D2P0DMB1 279 aaPredicted RBP13.24□□□□□ -0.29
CIT-210ENST00000539413 TNFRSF1AP19438 455 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 PAICSP22234 425 aaKnown RBP13.24□□□□□ -0.29
CIT-210ENST00000539413 DAPP51397 102 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 DVL1P1P54792 670 aaPredicted RBP13.24□□□□□ -0.29
CIT-210ENST00000539413 MALLQ13021 153 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 EIF2B1Q14232 305 aaKnown RBP13.24□□□□□ -0.29
CIT-210ENST00000539413 ATP6AP1Q15904 470 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 FAHD1Q6P587 224 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 DRAM2Q6UX65 266 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 ZNF771Q7L3S4 317 aaPredicted RBP13.24□□□□□ -0.29
CIT-210ENST00000539413 DPY19L4Q7Z388 723 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 ZNF283Q8N7M2 679 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 OR13G1Q8NGZ3 307 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 OR5K1Q8NHB7 308 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 ZMYND19Q96E35 227 aaPredicted RBP13.24□□□□□ -0.29
CIT-210ENST00000539413 OR2V2Q96R30 315 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 KCNJ15Q99712 375 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 SLC30A2Q9BRI3 323 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 ZNF665Q9H7R5 613 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 MARCH7Q9H992 704 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 SLC25A19Q9HC21 320 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 PAPOLBQ9NRJ5 636 aaKnown RBP13.24□□□□□ -0.29
CIT-210ENST00000539413 TMEM106BQ9NUM4 274 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 KIF17Q9P2E2 1029 aa13.24□□□□□ -0.29
CIT-210ENST00000539413 TANC2Q9HCD6 1990 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 ZNF878C9JN71 531 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 MSMBP08118 114 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 SLC2A1P11166 492 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 SELEP16581 610 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 CRISP1P54107 249 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 SLC3A1Q07837 685 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 TAF13Q15543 124 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 PGAP1Q75T13 922 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 MRPL21Q7Z2W9 205 aaKnown RBP13.23□□□□□ -0.29
CIT-210ENST00000539413 GLCCI1Q86VQ1 547 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 CPOQ8IVL8 374 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 TIGD4Q8IY51 512 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 OR2AE1Q8NHA4 323 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 DNAJC9Q8WXX5 260 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 DUS3LQ96G46 650 aaKnown RBP13.23□□□□□ -0.29
CIT-210ENST00000539413 MEGF10Q96KG7 1140 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 AMELYQ99218 206 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 ABHD6Q9BV23 337 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 TMEFF2Q9UIK5 374 aaPredicted RBP13.23□□□□□ -0.29
CIT-210ENST00000539413 AP4S1Q9Y587 144 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 N6AMT1Q9Y5N5 214 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 NPTNQ9Y639 398 aa13.23□□□□□ -0.29
CIT-210ENST00000539413 ABCA2Q9BZC7 2435 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 ISPDA4D126 451 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 SELENOFO60613 162 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 IFNA2P01563 188 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 IGHV2-5P01817 119 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 HLA-DPB1P04440 258 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 SRD5A1P18405 259 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 HNF1AP20823 631 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 FASP25445 335 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 ZNF92Q03936 586 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 KLHL12Q53G59 568 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 GLYATL3Q5SZD4 288 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 AMIGO2Q86SJ2 522 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 PEG10Q86TG7 708 aaKnown RBP13.22□□□□□ -0.29
CIT-210ENST00000539413 BBS1Q8NFJ9 593 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 TMEM186Q96B77 213 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 RAB39BQ96DA2 213 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 PLEKHA8Q96JA3 519 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 SIGLEC11Q96RL6 698 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 MDFIQ99750 246 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 GAL3ST1Q99999 423 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 GCM1Q9NP62 436 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 TMEM100Q9NV29 134 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 TVP23BQ9NYZ1 205 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 PPP1R3CQ9UQK1 317 aa13.22□□□□□ -0.29
CIT-210ENST00000539413 CUBNO60494 3623 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 IGHV3-64DA0A0J9YX35 117 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 A0A1B0GWJ7 208 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 F5H5P2 479 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 G3V2T6 193 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 PRODHO43272 600 aa13.21□□□□□ -0.29
CIT-210ENST00000539413 MITFO75030 526 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms