RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CT45A9P0DMV2 189 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 CENPAP49450 140 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 CCR4P51679 360 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 RAB38P57729 211 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 CT45A2Q5DJT8 189 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 CLEC18BQ6UXF7 455 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 MAMDC2Q7Z304 686 aaPredicted RBP16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 CSNK1A1LQ8N752 337 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 OR8U1Q8NH10 309 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 FOXN4Q96NZ1 517 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 C5orf66Q9H5L9 145 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 TREM2Q9NZC2 230 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 LRP12Q9Y561 859 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 FLVCR1Q9Y5Y0 555 aa16.62■□□□□ 0.25
SFSWAP-207ENST00000538548 SCGNO76038 276 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 OR6A2O95222 327 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 HTR5AP47898 357 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 RAB5CP51148 216 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 SGCGQ13326 291 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 RAB32Q13637 225 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 TMEM240Q5SV17 173 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 TMEM268Q5VZI3 342 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 GATSQ8NAP1 163 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 OR4K15Q8NH41 348 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 TMEM230Q96A57 120 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 IP6K3Q96PC2 410 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 ELF4Q99607 663 aaPredicted RBP16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 RGCCQ9H4X1 137 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 MRPL22Q9NWU5 206 aaKnown RBP16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 GPR132Q9UNW8 380 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 CEACAM18A8MTB9 384 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 CST4P01036 141 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 GSK3AP49840 483 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 UNC119Q13432 240 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 CST6Q15828 149 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 NUP54Q7Z3B4 507 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 GRASPQ7Z6J2 395 aaPredicted RBP16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 FRMD1Q8N878 549 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 FAM3CQ92520 227 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 C2orf50Q96LR7 162 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 SLC26A1Q9H2B4 701 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 FGF22Q9HCT0 170 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 STARD10Q9Y365 291 aa16.61■□□□□ 0.25
SFSWAP-207ENST00000538548 LOC107986453A0A1B0GWG9 222 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 PLGP00747 810 aaPredicted RBP16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 GNB3P16520 340 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 ID4P47928 161 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 SLC9A3R2Q15599 337 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 ADAM5Q6NVV9 412 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 ZNF761Q86XN6 746 aaPredicted RBP16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 PFDN5Q99471 154 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 ABHD6Q9BV23 337 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 TOLLIPQ9H0E2 274 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 CNTD2Q9H8S5 307 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 DPP7Q9UHL4 492 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 LTBP2Q14767 1821 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 TBC1D3DA0A087WVF3 549 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 TBC1D3LB9A6J9 549 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 M0R036 132 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 TBC1D3HP0C7X1 549 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 IGFALSP35858 605 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 TCEA2Q15560 299 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 TBC1D3CQ6IPX1 549 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 TBC1D3Q8IZP1 549 aaPredicted RBP16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 TAAR8Q969N4 342 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 SCARF2Q96GP6 870 aaPredicted RBP16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 OR10C1Q96KK4 312 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 OR2M4Q96R27 311 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 R4GMQ9 66 aa16.6■□□□□ 0.25
SFSWAP-207ENST00000538548 K7EQS6 105 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 ISG15P05161 165 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 VIPR2P41587 438 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 OR2B8PP59922 312 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 BTG2P78543 158 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 POC1AQ8NBT0 407 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 OR10G6Q8NH81 332 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 RAB3CQ96E17 227 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 MAP3K3Q99759 626 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 NUDT16L1Q9BRJ7 211 aaKnown RBP16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 APOOQ9BUR5 198 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 PLA2G2EQ9NZK7 142 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 USP34Q70CQ2 3546 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 A0A1W2PP55 124 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 PRSS37A4D1T9 235 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 OIP5O43482 229 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 IL15RAQ13261 267 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 SKP2Q13309 424 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 CD226Q15762 336 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 C1QL4Q86Z23 238 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 ARRDC1Q8N5I2 433 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 FAM24BQ8N5W8 94 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 COMMD1Q8N668 190 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 TWSG1Q9GZX9 223 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 METTL8Q9H825 291 aaKnown RBP16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 LMAN1LQ9HAT1 526 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 THAP10Q9P2Z0 257 aaPredicted RBP16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 EMC9Q9Y3B6 208 aa16.59■□□□□ 0.25
SFSWAP-207ENST00000538548 MYO15AQ9UKN7 3530 aa16.58■□□□□ 0.25
SFSWAP-207ENST00000538548 ZNF264O43296 627 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms